PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00216g00012.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 295aa    MW: 32837.9 Da    PI: 7.4129
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00216g00012.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.73.6e-12142184855
                               HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +Er+RR+++ ++f  L  l+P +     kKl+Ka++L  A++YIk+L+
  Peaxi162Scf00216g00012.1 142 AERKRREQLTQRFVALSVLVPGL-----KKLDKASVLGDAIKYIKQLK 184
                               8**********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.091134183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.52E-11139188No hitNo description
SMARTSM003531.9E-14140189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.96E-15140201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-15141197IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-10142183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MTQFDELSFN NNPNFSSSLY PSTIQAYSQA AGLLEEKPDA FFSTSRLETH QNTSNISSSP  60
SVIFFANSPI AITTVPKYSE NLTTSVKTEV PSSGTTINFS SSAISVDSDI DESQHIIQEL  120
GFDTQKRSFS RTRFKAQGRV LAERKRREQL TQRFVALSVL VPGLKKLDKA SVLGDAIKYI  180
KQLKERVKAL EEKSKNYSEE PVVAVKRARL LSNCDDSISS DENSNISTER SSFPDIEIRA  240
SAENVLINIY CNKQTGIIKE IFSQVENLNL TIIRSSVMPF GDNITNITII AQVRT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147ERKRRE
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By ethylene (ACC) and jasmonic acid (JA) treatments. {ECO:0000269|PubMed:12679534}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009605673.19e-93PREDICTED: transcription factor bHLH18
RefseqXP_009605674.19e-93PREDICTED: transcription factor bHLH18
SwissprotQ9T0724e-44BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A1U8G0M35e-91A0A1U8G0M3_CAPAN; transcription factor bHLH18-like
TrEMBLM1D0K44e-91M1D0K4_SOLTU; Uncharacterized protein
STRINGXP_009605673.14e-92(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45081443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.13e-44bHLH family protein