PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00221g00512.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 243aa MW: 27715.6 Da PI: 9.6724

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00221g00512.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.7	0.00012	216	241	4	29
HHHHHHHHHHHHHHHHHHHHHCTSCC CS HLH 4 ahnerErrRRdriNsafeeLrellPk 29 h + Err +++N +f+ Lr+llP+ Peaxi162Scf00221g00512.1 216 HHMISERRMHEKLNGSFQVLRSLLPP 241 68899********************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence Send to blast
QKLNYLHAQN ILLNHINFHH FVLANASSFC SSLTFLDRIY KDENNVAQRL FEEYRHLWLI 60 MDNGRIPELA FKSKLPYMEL LLIFNHMPPI QCIFNSTGKL GSRNGDDEHF SKHFSSQAAA 120 PAPTPAPGVT RGLPHQLLSI DQNRPSSSSS LSIDSPEYFS SIGETEDAAL TRAYLAVRTR 180 PLNMLKRSII LFRNLNMMTR QEQGQANRFP SSTQVHHMIS ERRMHEKLNG SFQVLRSLLP 240 PGT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_027774144.1	2e-38	putative transcription factor bHLH041 isoform X2
TrEMBL	A0A3Q7H7U5	1e-35	A0A3Q7H7U5_SOLLC; Uncharacterized protein
STRING	Solyc07g039570.2.1	2e-36	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4567	23	39

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	9e-11	bHLH family protein