PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00226g10014.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 219aa    MW: 24838.3 Da    PI: 6.7891
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00226g10014.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY924.5e-29133191159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               ldDgy+WrKYG+K+vk++++pr+YY+C+s gC+vkk+ver+ +d +++++tYeg+Hnhe
  Peaxi162Scf00226g10014.1 133 LDDGYKWRKYGKKKVKSNTNPRHYYKCSSGGCKVKKRVERDGNDSSYLITTYEGKHNHE 191
                               59********************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.9E-31119193IPR003657WRKY domain
SuperFamilySSF1182902.22E-26126193IPR003657WRKY domain
PROSITE profilePS5081130.469128193IPR003657WRKY domain
SMARTSM007748.2E-31133192IPR003657WRKY domain
PfamPF031066.2E-23134191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MFSSSTFQET SNIIPHQTIY PNFAFAPLIN SHMNNQDCGQ NTYQDFDTSF LDQLIGGDSN  60
SNSNNSLDAS IYSQNHFMQE ISTTYSGSSS ANSFDATPTN IHMNESSNME IEKEKKAEKH  120
AIAFRTKTEL EILDDGYKWR KYGKKKVKSN TNPRHYYKCS SGGCKVKKRV ERDGNDSSYL  180
ITTYEGKHNH ESPFVVYCHE TPSVSFLSEL SIQAASSWR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A3e-25123193777Probable WRKY transcription factor 4
2lex_A3e-25123193777Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009804802.11e-107PREDICTED: probable WRKY transcription factor 51 isoform X2
RefseqXP_016487859.11e-107PREDICTED: probable WRKY transcription factor 51 isoform X2
TrEMBLA0A1S4BG691e-106A0A1S4BG69_TOBAC; probable WRKY transcription factor 51 isoform X2
TrEMBLA0A1U7YL531e-106A0A1U7YL53_NICSY; probable WRKY transcription factor 51 isoform X2
STRINGXP_009804801.11e-102(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA134941217
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64810.11e-23WRKY DNA-binding protein 51