PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00228g00056.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

WRKY

Protein Properties

Length: 306aa MW: 33718 Da PI: 5.5215

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00228g00056.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	53.9	3.6e-17	149	189	19	59
SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 + +sYYrCt+a+C vkk+vers+edp++v++tYeg+H+h+ Peaxi162Scf00228g00056.1 149 NKKQSYYRCTTATCGVKKRVERSSEDPSIVVTTYEGTHTHP 189 5678************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00774	7.6E-10	143	190	IPR003657	WRKY domain
SuperFamily	SSF118290	3.14E-14	147	191	IPR003657	WRKY domain
Pfam	PF03106	3.7E-13	147	189	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	5.7E-16	147	191	IPR003657	WRKY domain
PROSITE profile	PS50811	17.19	152	191	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MAEKENKLKQ ETSPLENSTF SDQIPASSTS YSLSSIFHDM SPCDNQLTEK GSNSFSMLDT 60 MFASQYPITT TPSIFDLFHQ PPLPPPLLIS SQPKIPAHQI VNNNTPVATP NSSSISSSSN 120 EAANDHDQDT KTLVVDQQQA DEEKDQDKNK KQSYYRCTTA TCGVKKRVER SSEDPSIVVT 180 TYEGTHTHPC PITARGSIGI LPETTTYGGS IGGLGGGTSS LFIPQFHYHQ LQQQQQQHQQ 240 QQATYFQTPT LPLNFSTGDN SSLFSTNSSQ ERRFSPSTSS SSSMARDHGL LQDMVPSQMR 300 RDPKEE

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009764101.1	6e-82	PREDICTED: probable WRKY transcription factor 48 isoform X2
Refseq	XP_016506501.1	6e-82	PREDICTED: probable WRKY transcription factor 48 isoform X2
TrEMBL	A0A1S4CZF3	1e-80	A0A1S4CZF3_TOBAC; probable WRKY transcription factor 48 isoform X2
TrEMBL	A0A1U7VGS5	1e-80	A0A1U7VGS5_NICSY; probable WRKY transcription factor 48 isoform X2
STRING	XP_009764098.1	8e-81	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1309	24	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	1e-21	WRKY DNA-binding protein 48