PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00228g00112.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

GRAS

Protein Properties

Length: 126aa MW: 14409.4 Da PI: 9.2202

Description

GRAS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00228g00112.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GRAS	21.5	2.5e-07	27	80	5	57
GRAS 5 LlecA.eavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsv 57 Ll++ e++s+++ +a++lL+ ++ sp+g+++qR + ++ eAL++r+ +++ Peaxi162Scf00228g00112.1 27 LLQASdEMFSKRHYGRARKLLSLCNQSTSPTGTSVQREVYFYGEALRERIDKET 80 555551456777888***********************************9932 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03514	8.8E-5	27	80	IPR005202	Transcription factor GRAS

Sequence ? help Back to Top
Protein Sequence Length: 126 aa Download sequence Send to blast
MARTQLLQYT SKKEDDFISD DLELALLLQA SDEMFSKRHY GRARKLLSLC NQSTSPTGTS 60 VQREVYFYGE ALRERIDKET GALPPTDPKV VKRNHLFGSE TFCKCMLSVT AFRPSGSIRW 120 NLSNLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015169309.1	1e-25	PREDICTED: DELLA protein RGL3-like
TrEMBL	M1BZ59	3e-24	M1BZ59_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400056229	5e-25	(Solanum tuberosum)