PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00243g00151.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 192aa    MW: 21529.1 Da    PI: 10.5807
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00243g00151.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.5e-193079255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              +y+GVr ++ +gr+++eIrdp   g+++r++lg+f+t+eeAa+a++ a++ ++g
  Peaxi162Scf00243g00151.1 30 HYRGVRKRP-WGRFAVEIRDP---GHKTRVWLGTFDTPEEAARAYDTAARLFRG 79
                              69*******.**********8...545**********************98887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.24E-213088IPR016177DNA-binding domain
SMARTSM003803.9E-373093IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.4E-313087IPR001471AP2/ERF domain
PfamPF008475.1E-133078IPR001471AP2/ERF domain
PROSITE profilePS5103223.3273087IPR001471AP2/ERF domain
CDDcd000188.67E-303087No hitNo description
PRINTSPR003672.8E-113142IPR001471AP2/ERF domain
PRINTSPR003672.8E-115369IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MAQQKENGDL AAVTVAATAA KRGRSSDELH YRGVRKRPWG RFAVEIRDPG HKTRVWLGTF  60
DTPEEAARAY DTAARLFRGN RAVTNFPPRN DDNLKNDYLD KLKTQRNNNV TKNVTNNVIN  120
DRFSCGVPPT ARDRYYLEVL TRAGVIFRDL RNMVDFFGGG GGSNGGIQHQ PPNTNNNRGL  180
NLELSLAPPW TM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-212287672Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways. Transcription factor that binds to the GCC-box pathogenesis-related promoter element. Acts as a transcriptional inhibitor and may regulate other AtERFs (By similarity). {ECO:0000250, ECO:0000269|PubMed:11487705}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009591054.12e-52PREDICTED: ethylene-responsive transcription factor 8-like
SwissprotQ9FE672e-30ERF80_ARATH; Ethylene-responsive transcription factor 9
TrEMBLR4WAH86e-51R4WAH8_TOBAC; Ethylene response factor #208
STRINGXP_009591054.17e-52(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1535068
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.12e-31erf domain protein 9
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]
  3. Li B, et al.
    Network-Guided Discovery of Extensive Epistasis between Transcription Factors Involved in Aliphatic Glucosinolate Biosynthesis.
    Plant Cell, 2018. 30(1): p. 178-195
    [PMID:29317470]