PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00245g00112.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 315aa    MW: 36489.4 Da    PI: 5.4949
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00245g00112.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.92.3e-20131423128
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeek.ew.yfFskrdkkya.tgkrknr.atksg 81 
                                G+rF+P+deel+ +yL k v g +++++++ ++vd+y   +P dL  + + +++  ++ yfF+k  k +  ++k+ +r  +  g
  Peaxi162Scf00245g00112.1  13 LGIRFRPSDEELI-RYLMKFVCGMPFKCHHIRRDVDLYGNkKPCDLFdELFPEGDPtDVnYFFAKLTKVSDlSKKNFKRtLVGGG 96 
                               69***********.9*************8888999**97549****634443433334459**9999887745667777567899 PP

                       NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                Wk   k k+v +kkg+ +g k+++ f   r+++ e+  W m+ey+l
  Peaxi162Scf00245g00112.1  97 SWKGLDKGKDVRNKKGSFIGSKRSFRFQ-DRKSSDENIVWNMKEYSL 142
                               ***************************8.6777779*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.69311169IPR003441NAC domain
SuperFamilySSF1019411.2E-2011169IPR003441NAC domain
PfamPF023659.0E-1314142IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MLMNNTCSSY SMLGIRFRPS DEELIRYLMK FVCGMPFKCH HIRRDVDLYG NKKPCDLFDE  60
LFPEGDPTDV NYFFAKLTKV SDLSKKNFKR TLVGGGSWKG LDKGKDVRNK KGSFIGSKRS  120
FRFQDRKSSD ENIVWNMKEY SLSNAILEKL KQRRQIRHED IVLCRIKRKP AVHEKKGSSS  180
NNFDQQVPVE IENNNIVVAP EQPIMHLGYC VEGENNCNMD SSCVPASCLE NKNNSEEIIT  240
SRFEFFSERP IAQTECLDDQ IDHINSCVPM FNFDQIEFEH EKDNVPSMEV TLSEFNMVLN  300
EDLLDLLTST EELFQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
STRINGXP_009772253.11e-49(Nicotiana sylvestris)
STRINGXP_009786835.11e-47(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.19e-14NAC domain containing protein 2