PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00245g00118.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 112aa    MW: 13201.3 Da    PI: 10.1716
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00245g00118.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.74.3e-1431106108
                       NAM   6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLp.kkvkaeek.ew.yfFskrdkkyat.gkrknr.atksgyWk 84 
                               rF+P+deelv +yL k v g ++e++++ ++vd+y   +P+dL  + + +++  ++ yfF+k  k + + +k+ +r  +  g Wk
  Peaxi162Scf00245g00118.1   3 RFRPSDEELV-RYLMKFVCGMPFECHHIRRDVDLYGNkKPRDLFdELFPEGDPtDVnYFFAKLTKVSDRsKKNFKRtLVGGGSWK 86 
                               9*********.9*************8888999**97549****63444343333445***9999887752556677567799*** PP

                       NAM  85 atgkdkevlskkgelvglkktLvf 108
                                  k k+v +kkg +  + + L f
  Peaxi162Scf00245g00118.1  87 GLDKGKDVRNKKGFVYRVEEKLLF 110
                               **********98888877777777 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.3591112IPR003441NAC domain
PfamPF023651.6E-73103IPR003441NAC domain
SuperFamilySSF1019412.88E-123104IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    Send to blast
MKRFRPSDEE LVRYLMKFVC GMPFECHHIR RDVDLYGNKK PRDLFDELFP EGDPTDVNYF  60
FAKLTKVSDR SKKNFKRTLV GGGSWKGLDK GKDVRNKKGF VYRVEEKLLF SG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016556279.12e-33PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A2G3C8631e-32A0A2G3C863_CAPCH; Uncharacterized protein
STRINGXP_009786835.15e-26(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13516214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62380.13e-06NAC-domain protein 101