PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00245g00411.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family B3
Protein Properties Length: 166aa    MW: 18430.1 Da    PI: 5.0346
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00245g00411.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.12.1e-1541129194
                               EEEE-..-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                        B3   1 ffkvltpsdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                               f+ +l++s+v ++   l lp k + +    +++++ ++l + sg++W++ +  +++s r  l++GW++Fv++++L+ gD +vF+l
  Peaxi162Scf00245g00411.1  41 FDLILSKSHVVSNhTGLHLPEKICPKL---PPGEVPVVLITNSGKTWDMIC--TGGSTR-RLKNGWQNFVDDKNLRIGDGLVFEL 119
                               566778888877756799****99766...345677***************..888877.69**********************9 PP

                               -SSSEE..EE CS
                        B3  85 dgrsefelvv 94 
                               ++ s+++ ++
  Peaxi162Scf00245g00411.1 120 IECSTAKIKF 129
                               9655554444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019362.16E-1737134IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.102.5E-1538135IPR015300DNA-binding pseudobarrel domain
CDDcd100176.67E-1739135No hitNo description
SMARTSM010199.2E-941133IPR003340B3 DNA binding domain
PROSITE profilePS5086311.77342137IPR003340B3 DNA binding domain
PfamPF023621.4E-1244129IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MFKTLMLYYK GPAKNPKIGK SVANDEDEDD RSCPLTGKPY FDLILSKSHV VSNHTGLHLP  60
EKICPKLPPG EVPVVLITNS GKTWDMICTG GSTRRLKNGW QNFVDDKNLR IGDGLVFELI  120
ECSTAKIKFK MQILRGDFPS ELLSDSDSEN SDCDEDGTAE NPILII
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018630850.12e-58PREDICTED: B3 domain-containing protein Os04g0386900-like
TrEMBLA0A1U7Y1E48e-55A0A1U7Y1E4_NICSY; B3 domain-containing protein Os04g0386900-like
STRINGXP_009617043.16e-60(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA18192154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.12e-07B3 family protein