PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00258g00008.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 203aa    MW: 23839.6 Da    PI: 8.8464
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00258g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM36.81.2e-11111183127
                       NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                               +G rFhPtd el+  yL+k ++g++++  +++      ++  ++L        +++  F k++kk+ + kr  r+  + +Wk + 
  Peaxi162Scf00258g00008.1  11 MGERFHPTDVELI-SYLEKFLKGEPISS-KCM-----PYSTWENLC-------NHLGRFLKKKKKK-HHKRFIRTCGNVTWKGQT 80 
                               699**********.9**********888.322.....223334554.......2333466665554.568*************** PP

                       NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                               +  +++s k+  v+ k+++v+  ++++++++  W+m+ey 
  Peaxi162Scf00258g00008.1  81 SGDSIKS-KEIIVWFKRSFVYE-NTQESTQHKGWLMKEYF 118
                               *****99.9999********97.677778999*******6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100512.2691139IPR003441NAC domain
SuperFamilySSF1019414.32E-1611138IPR003441NAC domain
PfamPF023656.8E-1012117IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MSSSIPRFHI MGERFHPTDV ELISYLEKFL KGEPISSKCM PYSTWENLCN HLGRFLKKKK  60
KKHHKRFIRT CGNVTWKGQT SGDSIKSKEI IVWFKRSFVY ENTQESTQHK GWLMKEYFVG  120
DENNIPKEDD FVICQIKKNT KEKFVEDEDV ILYRILSAIC CMDLMTAALL DQYNQPLIHK  180
MELKSESMPH QQPCPAQQST RAV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009789986.13e-34PREDICTED: NAC domain-containing protein 78-like
RefseqXP_016490087.13e-34PREDICTED: NAC domain-containing protein 78-like
TrEMBLA0A1S4BMM28e-33A0A1S4BMM2_TOBAC; NAC domain-containing protein 78-like
TrEMBLA0A1U7XK548e-33A0A1U7XK54_NICSY; NAC domain-containing protein 78-like
STRINGXP_009789986.11e-33(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8141386