PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00276g00118.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family M-type_MADS
Protein Properties Length: 66aa    MW: 7684.23 Da    PI: 10.95
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00276g00118.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.82.1e-111243435
                              -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EE CS
                    SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaev 35
                              ++ +  qvtfsk +n +lKKA+ELS  Cd e+
  Peaxi162Scf00276g00118.1 12 KSAISSQVTFSKQLNRLLKKAFELSLQCDCEI 43
                              677889***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5006615.054147IPR002100Transcription factor, MADS-box
SMARTSM004324.6E-4158IPR002100Transcription factor, MADS-box
SuperFamilySSF554554.32E-11347IPR002100Transcription factor, MADS-box
PRINTSPR004045.9E-8323IPR002100Transcription factor, MADS-box
PfamPF003193.6E-91644IPR002100Transcription factor, MADS-box
PRINTSPR004045.9E-82338IPR002100Transcription factor, MADS-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    Send to blast
MVRGKAQIRH TKSAISSQVT FSKQLNRLLK KAFELSLQCD CEIKNLMSKE LIAKKISQKE  60
VMRKYK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.14e-13AGAMOUS-like 20