PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00284g00719.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 246aa    MW: 27798.5 Da    PI: 8.6719
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00284g00719.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.72.3e-1464110354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               r+h+e+E+rRRdriN  +++Lr+l+P +     +K++Ka+ L+ +ve++k+L
  Peaxi162Scf00284g00719.1  64 RSHSEAEKRRRDRINAQLSTLRKLIPRS-----EKMDKAALLRSVVEHVKEL 110
                               78************************98.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.41861110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-1564113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.0E-1264110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.04E-1264111No hitNo description
SuperFamilySSF474594.32E-1464121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-1367116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048735.73E-8150218No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MDKSSCCEYW PGTETAAHNQ VSPFVLPNSC DVTSFQLYDH PSYFAAPWSQ IEEFSEDRSV  60
SASRSHSEAE KRRRDRINAQ LSTLRKLIPR SEKMDKAALL RSVVEHVKEL KGRAKEISKV  120
LNTPSDIDEV IIEHIVEEED HSNNSIFLKV SLCCDDRPEL FSELNRGLKN LKLTTVEANI  180
SSLGGRIKCT FVLCPSGSFT KENGVRINSL KQSLRVVLGK IATSPSTSNY RIKSKRQRFF  240
LPANYS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1232237KSKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009632043.11e-118PREDICTED: transcription factor bHLH51-like
RefseqXP_016503104.11e-118PREDICTED: transcription factor bHLH51-like
TrEMBLA0A1S4CQ591e-116A0A1S4CQ59_TOBAC; transcription factor bHLH51-like
STRINGXP_009632043.11e-117(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA58202235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40200.12e-43bHLH family protein