PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00291g00015.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 326aa    MW: 37023.1 Da    PI: 9.0264
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00291g00015.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.49.2e-07266310454
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               + n  Er+RR ++++    L+ ++P +      +++ ++iL +Av+Y+ksL
  Peaxi162Scf00291g00015.1 266 TSNCSERKRR-KLKKMVKALKGIVPGS-----SRMNTVTILDEAVRYLKSL 310
                               5689999998.7*************97.....7****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.287261310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.76E-10265320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.0E-9265321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-9265315No hitNo description
PfamPF000101.2E-4266310IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003536.2E-9268316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
WLGLKTYSIL GWTDQHAVGV FICALGHILS CHSSIRKLRM YIAITLKRYR AVKEAGEIKM  60
HVWSVAYYQL MLVCQAEYFR QLLKPVTNYQ ISYQKPPFSP EYQAGGNNLF DIPTPSVVGT  120
MALPNGFRPS VPIHGFKFQS SEACPKNFII FDQTDHRSQI MFHPATASKF PYPDLSFNAT  180
CFPDGMNRKV ANNENTEVSS YLKEDSDDIN ALLSSEEAEY EEYDDEEVST ARTDANYGNS  240
SPESYSNYYC QSKKSRTYFR KSSGSTSNCS ERKRRKLKKM VKALKGIVPG SSRMNTVTIL  300
DEAVRYLKSL KVEVQKLGVE NLKTFA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754410.0HG975441.1 Solanum pennellii chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019226808.11e-140PREDICTED: transcription factor bHLH144
TrEMBLA0A2G2XEA81e-157A0A2G2XEA8_CAPBA; Uncharacterized protein
STRINGXP_009801820.11e-139(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81241924
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.24e-28bHLH family protein