PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00304g00719.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 270aa    MW: 31131.8 Da    PI: 5.4273
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00304g00719.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY76.33.6e-24126187159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               ++Dgy+WrKYGqK++ +s++pr YYrCt++   +C+++k+v+r +ed  + ++tY g+H ++
  Peaxi162Scf00304g00719.1 126 MEDGYAWRKYGQKVILNSKYPRCYYRCTYKynqNCRATKQVQRINEDSIIYQTTYFGHHICK 187
                               58***************************9999**************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.7E-25112188IPR003657WRKY domain
SuperFamilySSF1182907.72E-25120187IPR003657WRKY domain
PROSITE profilePS5081121.459121184IPR003657WRKY domain
SMARTSM007741.2E-35126188IPR003657WRKY domain
PfamPF031061.2E-22127187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MVLESPLTNW KRLIKELVKG KEFAVQLQTL LQQQPLIANH DYSDSSSAHD LILKIWTSFT  60
EAISELTSSS SKGVFQIPEA YSDGIGDRKL SEDFGSEVKQ VVKHRRGCYK RRKSLESSRM  120
TESAVMEDGY AWRKYGQKVI LNSKYPRCYY RCTYKYNQNC RATKQVQRIN EDSIIYQTTY  180
FGHHICKESQ LQIITSESDL IEESLPFEAK PNVRSDVSDD VSSTLDSDLW KDLSMSSSHS  240
APALGENLSY LDMEEFSKFD DFHFEDIEFS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A7e-20126187869OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016453986.12e-79PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A1S3YNY66e-78A0A1S3YNY6_TOBAC; probable WRKY transcription factor 70
STRINGXP_009793213.12e-76(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA61992233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-34WRKY DNA-binding protein 70