PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00314g00642.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Trihelix

Protein Properties

Length: 341aa MW: 38960.9 Da PI: 4.7793

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00314g00642.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	69.4	6.8e-22	40	133	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 rW++qe+l+Lie+++ +e++ r +k + +p+W ++s+++r+ g +r+p+qC+++w+n+ ++kkik++e++++ s+s Peaxi162Scf00314g00642.1 40 RWSRQETLLLIEGKKITEDAHRGRKtcsifgsdKPEPKWNSISSYCRQYGANRGPTQCRKRWSNMISDFKKIKTWESQENGSSES 124 8***********966665553322366666699*****************************************9988889 PP trihelix 78 tcpyfdqle 86 + + ++l+ Peaxi162Scf00314g00642.1 125 YWTMRNDLR 133 999999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	5.54E-5	38	118	IPR009057	Homeodomain-like
Pfam	PF13837	1.3E-12	39	129	No hit	No description
Gene3D	G3DSA:1.10.10.60	7.6E-6	40	106	IPR009057	Homeodomain-like
PROSITE profile	PS50090	7.364	40	105	IPR017877	Myb-like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 341 aa Download sequence Send to blast
MTSGSTEMHE NTTSSADLVD GQQIPTEGTD DKSKTPRHPR WSRQETLLLI EGKKITEDAH 60 RGRKTCSIFG SDKPEPKWNS ISSYCRQYGA NRGPTQCRKR WSNMISDFKK IKTWESQENG 120 SSESYWTMRN DLRRENKLPS FFDREVYDVL DGKELTAEAN QLALVTITDE KVDYGRETVE 180 EEEEEEEEDE DEEQENREAE AISHTGRYII EDDVLLSPME EIGSNPLKEG VSKDKKAKFT 240 PSPMPISGEA KADQSGSDFW RSSMFQDRVK KRRQPSDGCT DTSLEYKLLK TLEQNTNMLH 300 KQLDAQINNR QLDSEQHKEN SASLIAAIHK VADALARVAD K

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019240956.1	1e-179	PREDICTED: trihelix transcription factor ASR3-like
TrEMBL	A0A1S4CN58	1e-174	A0A1S4CN58_TOBAC; trihelix transcription factor ASR3-like
TrEMBL	A0A1U7VZR6	1e-174	A0A1U7VZR6_NICSY; trihelix transcription factor GT-2-like
STRING	XP_009773262.1	1e-174	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1786	24	60

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-55	Trihelix family protein