PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00331g01020.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family GeBP
Protein Properties Length: 315aa    MW: 36273.6 Da    PI: 10.0824
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00331g01020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57377.32.6e-2475165297
                    DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdq 86 
                                f++++s+eDei++L G+i+fk++ g +p +++ +fy+f+ +s+sf +++ ql+eK+rr+ +K+ k+ +    g  ++ +++h+ 
  Peaxi162Scf00331g01020.1  75 SFSKIFSDEDEITILEGVIKFKKESGLDPRKNMVKFYNFIIESLSFPATRIQLSEKVRRFNEKYVKHLHC---G--TTPKTPHEL 154
                               699*****************************************************************99...4..456789*** PP

                    DUF573  87 kifelskkiWg 97 
                               k f+l++kiW 
  Peaxi162Scf00331g01020.1 155 KLFNLCRKIWV 165
                               **********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045042.2E-2176164IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MSEDGSGSGS GAQKFPRDKQ LLKKKRKRMR NKDAQVRKID SEKNLGNRIL YNETPSDEES  60
KTEKMQAKQS GKSKSFSKIF SDEDEITILE GVIKFKKESG LDPRKNMVKF YNFIIESLSF  120
PATRIQLSEK VRRFNEKYVK HLHCGTTPKT PHELKLFNLC RKIWVQVSEP HNLGEQHEVS  180
GQSEHHNMLE TAQLKQPNII PKSIKPENGM DLQALFDLRK RLIEDLQLIL NVMTRLHDNS  240
KQGSLKQCDL YAQSLRLLAK FQSFVVEKAK SPEMHHSPKL LEQEVLRAYF EAKLEHTQLI  300
SNAYTAFIKD HGAAA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA138051214
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01370.12e-11DNA-binding storekeeper protein-related transcriptional regulator