PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00350g00610.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 255aa    MW: 28315.5 Da    PI: 9.4091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00350g00610.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.65.9e-051441673255
                               ..TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  32 kapskKlsKaeiLekAveYIksLq 55 
                               +++s++ +Ka +L +++eY+++Lq
  Peaxi162Scf00350g00610.1 144 HNKSERTNKALMLDEVIEYMRQLQ 167
                               5699*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.94E-4124171No hitNo description
SuperFamilySSF474598.51E-6139183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-6146175IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    Send to blast
MHGLGPLHLL NNKPLSNSSP TQYTWDHHKP QVGGTLESIV NQATGIPHHR PKSPVDDIGG  60
DRGDELMSWF DTYIANTMTR YALVPSYTNT QNSHQRVAPS THVPSISGTC LVGCPTHGEV  120
EEEDNEKQSK VSSSTKRRRV AIKHNKSERT NKALMLDEVI EYMRQLQAQV QAMSNTMMYP  180
MMLPVAVQQQ LQMSMMAPAM RMRMVALTRP NATATPVVLH PTTSFMPITS AVSPRGRVNV  240
ANISCCSKSF IYLSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135139KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008375804.15e-29transcription factor UNE10 isoform X2
TrEMBLA0A498JF351e-33A0A498JF35_MALDO; Uncharacterized protein
STRINGXP_009762879.16e-26(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1578526
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.13e-11bHLH family protein