PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00351g00112.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 167aa    MW: 19057 Da    PI: 9.9497
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00351g00112.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.29.6e-51141392128
                       NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 
                               ppG+rFhP+deel+v+yL +kv++++l++  +i+ev++y+++PwdLp+ +  +e+ew+fFs+rd+ky++g r+nr+t+sgyWkat
  Peaxi162Scf00351g00112.1  14 PPGVRFHPSDEELIVHYLLNKVNSHPLPA-AIIAEVELYNYNPWDLPRLALFGEDEWFFFSPRDRKYPNGVRPNRTTSSGYWKAT 97 
                               9****************************.88***************76667899****************************** PP

                       NAM  87 gkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                               g+dk++ls+ g+ +g+kk Lvfy+g+apkg+ktdW+m eyrl
  Peaxi162Scf00351g00112.1  98 GTDKPILSSIGSRIGVKKALVFYTGKAPKGVKTDWIMIEYRL 139
                               *********99*****************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-577144IPR003441NAC domain
PROSITE profilePS5100552.05913161IPR003441NAC domain
PfamPF023655.3E-2614139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MAPFEIPLSS FHFPPGVRFH PSDEELIVHY LLNKVNSHPL PAAIIAEVEL YNYNPWDLPR  60
LALFGEDEWF FFSPRDRKYP NGVRPNRTTS SGYWKATGTD KPILSSIGSR IGVKKALVFY  120
TGKAPKGVKT DWIMIEYRLP DRAIQPSRSA GSMRVSLIIN HLLFLNQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A8e-64716711166NO APICAL MERISTEM PROTEIN
1ut4_B8e-64716711166NO APICAL MERISTEM PROTEIN
1ut7_A8e-64716711166NO APICAL MERISTEM PROTEIN
1ut7_B8e-64716711166NO APICAL MERISTEM PROTEIN
3swm_A8e-64716714169NAC domain-containing protein 19
3swm_B8e-64716714169NAC domain-containing protein 19
3swm_C8e-64716714169NAC domain-containing protein 19
3swm_D8e-64716714169NAC domain-containing protein 19
3swp_A8e-64716714169NAC domain-containing protein 19
3swp_B8e-64716714169NAC domain-containing protein 19
3swp_C8e-64716714169NAC domain-containing protein 19
3swp_D8e-64716714169NAC domain-containing protein 19
4dul_A8e-64716711166NAC domain-containing protein 19
4dul_B8e-64716711166NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027108046.15e-86NAC domain-containing protein 102-like
SwissprotQ8GY425e-66NAC25_ARATH; NAC transcription factor 25
TrEMBLA0A068UFT81e-84A0A068UFT8_COFCA; Uncharacterized protein
STRINGXP_006488646.17e-79(Citrus sinensis)
STRINGEOY330503e-78(Theobroma cacao)
STRINGXP_006424612.18e-79(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA133901117
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-68NAC domain containing protein 25