PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00358g01213.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

bHLH

Protein Properties

Length: 229aa MW: 25650.8 Da PI: 8.0466

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00358g01213.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.5	1.8e-11	175	223	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + ++ Ka++L + ++YI+sL+ Peaxi162Scf00358g01213.1 175 SHSLAERVRREKISERMKILQSLVPGC---DKVISGKAQMLDEIINYIQSLE 223 8************************...9*****************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	7.21E-9	169	227	No hit	No description
SuperFamily	SSF47459	9.55E-15	169	227	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.656	171	222	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.1E-15	175	227	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	7.1E-9	175	223	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.8E-10	177	228	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 229 aa Download sequence Send to blast
MAPAFSYLHQ SDDCLLDSSV VFPSFPIDIS EFLEVLNNPG TSQNRCFQNS QQQLAVNVST 60 VQESSNSNES TITNKSSSTI LEMESSAVML TNRMEISKES VAPIDRNRTT REGPSSRSFS 120 QSENIRDTDN GKKLRKSKDQ LTKEVKAKKG KWEDKKEAPT GYISVRAKRG QATDSHSLAE 180 RVRREKISER MKILQSLVPG CDKVISGKAQ MLDEIINYIQ SLENQVEVI

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	NP_001311839.1	1e-57	transcription factor bHLH137-like
Refseq	XP_016567722.1	1e-57	PREDICTED: transcription factor bHLH137-like isoform X1
TrEMBL	A0A0B5E953	3e-56	A0A0B5E953_CAPAN; Transcription factor Upa20
TrEMBL	A0A1U8G8R9	3e-56	A0A1U8G8R9_CAPAN; transcription factor bHLH137-like isoform X1
TrEMBL	A8TLW5	3e-56	A8TLW5_CAPAN; BHLH transcription factor Upa20
STRING	PGSC0003DMT400051137	2e-51	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA25269	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	6e-34	bHLH family protein