PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00374g00006.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 331aa    MW: 37230.6 Da    PI: 5.9261
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00374g00006.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY772.3e-24129190159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                               +dDg+ WrKYGqK++ +s++pr+YYrCt +   gC ++k+v+r + +p  + ++Y+g+H+++
  Peaxi162Scf00374g00006.1 129 VDDGHVWRKYGQKHILDSPYPRNYYRCTNKfdqGCAATKQVQRIQANPPRFRTMYQGHHTCR 190
                               59**************************99999***************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.4E-25119190IPR003657WRKY domain
PROSITE profilePS5081121.643124187IPR003657WRKY domain
SuperFamilySSF1182907.85E-24125191IPR003657WRKY domain
SMARTSM007742.8E-34129191IPR003657WRKY domain
PfamPF031063.7E-23130190IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MESSLWPENP LAHLKILIKE LHCGQEFTNR LREVIKKPLG NGCTNTMFAE DLVEKIMGSF  60
CKTLSILNSN EFNEDSKVPV AISPCRKGGR TSPGDSTGSC KTSSLKDGRG CNKKRKIPET  120
STKETSTLVD DGHVWRKYGQ KHILDSPYPR NYYRCTNKFD QGCAATKQVQ RIQANPPRFR  180
TMYQGHHTCR TYPTVSQILL EDSSTDDDSS VLLSFDSNVN YNHPYFPTFP SIKKEITEEF  240
SLSGIYSCNN QKQSSSTNYF ITSNDYLTPT AETTNDIKAT LSSGSDNVDF ISSGSVYDSC  300
CSTITSSMEM EMDMLVMRSI DFEDFPFEFE G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-19129190869OsWRKY45
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016448472.11e-153PREDICTED: probable WRKY transcription factor 70
TrEMBLA0A1S3Y8U01e-151A0A1S3Y8U0_TOBAC; probable WRKY transcription factor 70
STRINGXP_009765461.11e-136(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA42302143
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-34WRKY DNA-binding protein 70