PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00377g00029.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 421aa    MW: 45142.9 Da    PI: 8.6042
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00377g00029.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.58.9e-122482871155
                               HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               +RRd+iN+++ +L++l+P++      K +Ka++L ++++Y+k+Lq
  Peaxi162Scf00377g00029.1 248 KRRDKINQRMKTLQKLVPNS-----NKTDKASMLDEVIDYLKQLQ 287
                               8******************7.....5******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.75E-15228303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.1E-15228303IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.08E-14235291No hitNo description
SMARTSM003531.8E-12236292IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.811237286IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.3E-9248287IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0009506Cellular Componentplasmodesma
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 421 aa     Download sequence    Send to blast
MHGLGPRTRV PNNKPISNYG DTLESIVNQA TRCNIPHHHL KSAVDGNGHG GDEVVPWFNN  60
HPAVAGAPPV TGGSATLAMD ALVPCSKNPA TFNHHHRQSS SVHVPGVDGS THVGSCSGAT  120
ADWMTAPRVS NMEPSSRGGG ADMSVSGSAT CSRQLTIDTF DREMGVTTTG MFTSTSMGSP  180
ENTSSDKQFT NRTGDDHDSV CHSRAQREAG DEEDNKKGSK NSSSSTKRKR AAAIHNQSER  240
VSIYVSLKRR DKINQRMKTL QKLVPNSNKT DKASMLDEVI DYLKQLQAQV HMMSRMNMSP  300
AMVLAMQQQQ LQMSMMGMGM GMGMGMGVAG VVDMNTLSRP NITGLPPFLH PTAAAAFMQP  360
MASWPDNSSD RLTAAANVIP DPLAALLACQ SQPMTMDAYS RMAALYQQFQ QPATSSVPKN  420
G
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00034PBMTransfer from AT4G00050Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009586991.10.0PREDICTED: transcription factor UNE10 isoform X1
RefseqXP_009586993.10.0PREDICTED: transcription factor UNE10 isoform X3
TrEMBLA0A1S4ALX70.0A0A1S4ALX7_TOBAC; transcription factor UNE10-like
STRINGXP_009586991.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA43672132
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.11e-67bHLH family protein