PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00380g00817.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 251aa    MW: 28618.7 Da    PI: 8.335
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00380g00817.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.12.9e-1259105455
                               HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                h ++Er+RR++i + f  L  llP +     kK++Ka+iLe A   Ik+L+
  Peaxi162Scf00380g00817.1  59 EHVIAERKRRQKITKLFVSLAALLPGL-----KKMDKASILEGAAALIKQLR 105
                               5999***********************.....9*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.44955104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-1358116IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.9E-1059104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-1259123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.06E-1060106No hitNo description
SMARTSM003531.2E-1061110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MDDLALIFSH NNTSPFGMQE KNRETTRKRL HQGEKAAALA CIISFSRSTR IRSEEQAHEH  60
VIAERKRRQK ITKLFVSLAA LLPGLKKMDK ASILEGAAAL IKQLRERPDQ TVKDQSETKT  120
NNEKAADPAV AKAQNNQNTS FDMSNLPEVE VRSLDKEVLI TVCCKQQNMG TIDEIISKIQ  180
NLHLTIKTSN FMPFGSTTMH ITIVAQFTYY IYFTYHGEEN FESPTQNIKM NDEFCETIDH  240
LTEKLRLSIL K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16368ERKRRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009774018.12e-80PREDICTED: transcription factor bHLH18-like
TrEMBLA0A1U7W5Y14e-79A0A1U7W5Y1_NICSY; transcription factor bHLH18-like
STRINGXP_009774018.16e-80(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA14501910
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-29bHLH family protein