PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00382g00051.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 202aa    MW: 23425.4 Da    PI: 5.279
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00382g00051.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.71.6e-1464111354
                       AP2   3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                               y+GVr +k +g++ AeIr  +     + kr +lg+f taeeA++ + a ++++e
  Peaxi162Scf00382g00051.1  64 YPGVRKRK-WGKFCAEIRSpF-----SkKRMWLGTFNTAEEAYEVYKAKKLEFE 111
                               99***999.**********66.....34******************99998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.96E-1762110No hitNo description
SMARTSM003802.0E-863117IPR001471AP2/ERF domain
SuperFamilySSF541717.85E-1463110IPR016177DNA-binding domain
PROSITE profilePS5103216.10763126IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.2E-1763112IPR001471AP2/ERF domain
PfamPF008473.5E-764111IPR001471AP2/ERF domain
PRINTSPR003672.3E-76475IPR001471AP2/ERF domain
PRINTSPR003672.3E-786102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    Send to blast
MEKNQEPQQT KIQRKIRVTI SDPDATESSS DEEQETKRPS KRTVYEIVHD HQVIKTAPFS  60
RKLYPGVRKR KWGKFCAEIR SPFSKKRMWL GTFNTAEEAY EVYKAKKLEF EMAKMSKEKE  120
KVAIFEKCEG DVQNSDSSNG IEGKSNVSSE EEQESDDMWM GEWVQISEDK EVKFCLKLGV  180
PIVDNYGFLL GEFSRLDDLS IC
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009599132.17e-66PREDICTED: ethylene-responsive transcription factor ERF069-like isoform X1
SwissprotQ9CA272e-21EF118_ARATH; Ethylene-responsive transcription factor ERF118
TrEMBLA0A1J6HS917e-65A0A1J6HS91_NICAT; Ethylene-responsive transcription factor erf118
STRINGXP_009599132.12e-65(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.26e-24ERF family protein
Publications ? help Back to Top
  1. Tran MK,Schultz CJ,Baumann U
    Conserved upstream open reading frames in higher plants.
    BMC Genomics, 2008. 9: p. 361
    [PMID:18667093]