PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00382g00511.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 132aa    MW: 14936.7 Da    PI: 5.1425
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00382g00511.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP242.91.2e-13855354
                       AP2  3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkle 54
                              ++GVr +k +g++ AeI++ +     + kr++lg+f taeeA k ++  ++++e
  Peaxi162Scf00382g00511.1  8 FPGVRKRK-SGKFCAEIKHpF-----SkKRIWLGTFVTAEEASKVYESKKLEFE 55
                              79***999.7*********66.....44******************99998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381231.3E-203132IPR017392AP2/ERF transcription factor ERF/PTI6
PROSITE profilePS5103215.277764IPR001471AP2/ERF domain
SMARTSM003808.7E-9770IPR001471AP2/ERF domain
PRINTSPR003677.4E-6819IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-12863IPR016177DNA-binding domain
PfamPF008473.5E-6855IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-16863IPR001471AP2/ERF domain
CDDcd000181.65E-15854No hitNo description
PRINTSPR003677.4E-63046IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    Send to blast
MSPSERLFPG VRKRKSGKFC AEIKHPFSKK RIWLGTFVTA EEASKVYESK KLEFEEKVKA  60
KNLKKSKNIK SEKSEVESCS SNTSLLVDAE ISDSSNGLEE KSNSTTEEEQ ESEFSTLDDL  120
RFSVCDIIEV ES
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009588241.12e-31PREDICTED: ethylene-responsive transcription factor ERF118-like
SwissprotQ9CA271e-14EF118_ARATH; Ethylene-responsive transcription factor ERF118
TrEMBLA0A1J6HS911e-28A0A1J6HS91_NICAT; Ethylene-responsive transcription factor erf118
TrEMBLA0A1S4BJX71e-28A0A1S4BJX7_TOBAC; ethylene-responsive transcription factor ERF069-like
STRINGXP_009588241.16e-31(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA50751534
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-15ERF family protein
Publications ? help Back to Top
  1. Tran MK,Schultz CJ,Baumann U
    Conserved upstream open reading frames in higher plants.
    BMC Genomics, 2008. 9: p. 361
    [PMID:18667093]