PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00384g00416.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family Trihelix
Protein Properties Length: 380aa    MW: 42160.3 Da    PI: 9.3134
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00384g00416.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.52.2e-1593183186
                  trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                               +W++  +++Liea  +   +l+rg+l++++W+ev++++     + ++  r+ +qCk++++ l+k+yk +k++ ++ + + +st+p
  Peaxi162Scf00384g00416.1  93 CWSEAATHTLIEAWGSHYLELKRGNLRQKHWQEVADAVnalhgHTKKQYRTDIQCKNRIDTLKKKYKIEKARVSQSNGRYVSTWP 177
                               7*************************************999987778889************************999999***** PP

                  trihelix  81 yfdqle 86 
                               +f++l+
  Peaxi162Scf00384g00416.1 178 HFNSLD 183
                               ****98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.3E-2691185No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 380 aa     Download sequence    Send to blast
MYRRPNRTEY FSPSFLSSSS SNPNFSNPIP PPPSSPMSDD DHDATPPSNK NSPSPSPSPP  60
PPCTSNLQLT LPPPPQQPAP TRRQAVFPAR EDCWSEAATH TLIEAWGSHY LELKRGNLRQ  120
KHWQEVADAV NALHGHTKKQ YRTDIQCKNR IDTLKKKYKI EKARVSQSNG RYVSTWPHFN  180
SLDDLIGPNF KLSPSPVTVT VTPRQNTPPM LPPPPSAVPV GPRSKRPAAA AIDHTVSRRN  240
FSAMAAAAAA SASEESDGDE ESETSSPGTM FTGYSRLADA IGRFAEIYER VEHAKQKQMV  300
ELEIQRMQFA KDLELQRMRL IMESQVNFEK LKRAKTSSQA GMSTRTVCNL KKSFGGDTHI  360
SNSVADSIKI CYSEDERGSC
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009760894.11e-134PREDICTED: uncharacterized protein LOC104213156
RefseqXP_016507452.11e-134PREDICTED: trihelix transcription factor ASIL2-like
TrEMBLA0A1S4D2041e-132A0A1S4D204_TOBAC; trihelix transcription factor ASIL2-like
TrEMBLA0A1U7VEZ51e-132A0A1U7VEZ5_NICSY; uncharacterized protein LOC104213156
STRINGXP_009760894.11e-133(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-46sequence-specific DNA binding transcription factors