PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00397g00002.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 229aa    MW: 26303.2 Da    PI: 4.6612
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00397g00002.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.11.1e-12910341128
                       NAM  41 kvePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy...kgrapkgek 118
                               + ePw++ ++ ++    +++  yf ++ +k++a+  r +r + +g+Wk + + ke+ ++kg+l+gl k+L +    k+++ k ++
  Peaxi162Scf00397g00002.1   9 DKEPWQIFHASNSheciNNNTRYFITQLKKEKANWIRFSRNIGKGTWKLQDSGKELRDTKGRLMGLVKSLKYTpnnKNNKGKNNN 93 
                               459****632222223355677***************************************************755445555568 PP

                       NAM 119 tdWvmheyrl 128
                                +W+m ey+l
  Peaxi162Scf00397g00002.1  94 GEWLMREYSL 103
                               89******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.0651126IPR003441NAC domain
SuperFamilySSF1019412.75E-179126IPR003441NAC domain
PfamPF023659.9E-612103IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MQFADLYADK EPWQIFHASN SHECINNNTR YFITQLKKEK ANWIRFSRNI GKGTWKLQDS  60
GKELRDTKGR LMGLVKSLKY TPNNKNNKGK NNNGEWLMRE YSLADNYLNA PQIKNKGFVI  120
CRIKKKEKKG NNIQEVNNDG DVEDDIQEYI NSVLEEDHVQ EDVDGQSNDT VLLADHIENN  180
EYCMIEGDDT VSVYDLLGSG DQVQIQDHPL PSDWGSADDV DLKTLLDCL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019238684.12e-66PREDICTED: NAC domain-containing protein 30-like
TrEMBLA0A1J6JUZ11e-59A0A1J6JUZ1_NICAT; Nac domain-containing protein 43
STRINGXP_009601217.19e-61(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04410.12e-09NAC domain containing protein 2