PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00397g00112.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 306aa    MW: 35008.5 Da    PI: 4.1765
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00397g00112.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.63.3e-12212617128
                       NAM  17 eyLkkkvegkkleleev.ikevdiykv.ePwdLpkkvka....eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                               +yL   +++++l+l++  ++ +d+y   ePw++ +++k+    +++  y  ++ +k +a +kr  r++ +g+Wk++ k k++l++
  Peaxi162Scf00397g00112.1   2 KYLLGFATNNPLPLQDElMQFADLYADkEPWQIFQACKSheciNKNARYIITQLKKVAAGKKRVARTVGKGTWKSQDKGKKLLDT 86 
                               68888888999888777477779997559****753333234355677999999999999************************* PP

                       NAM  96 kgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                               +g+l+g  +t+ +        + ++ +  + +W+m ey+l
  Peaxi162Scf00397g00112.1  87 SGRLMGFVTTFKYNpnnnkknTTNNDNNDNGEWLMREYSL 126
                               *************9877654434555566999******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.211149IPR003441NAC domain
SuperFamilySSF1019414.32E-183149IPR003441NAC domain
PfamPF023655.4E-630126IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MKYLLGFATN NPLPLQDELM QFADLYADKE PWQIFQACKS HECINKNARY IITQLKKVAA  60
GKKRVARTVG KGTWKSQDKG KKLLDTSGRL MGFVTTFKYN PNNNKKNTTN NDNNDNGEWL  120
MREYSLADKY LDASQIKNKD FVICRIKKKE TKGDNIQEVN NDGDVEGDVE EYINSVLQED  180
HVQEVVNGQS NDIVLLTDHI EENNNNEYYV VDSDGDVEGD VEEYINFVLQ EDHVQEDVNG  240
QLNDTVLPAD HIEENNNNEY SMIEGDDIIN VCDLFGSADQ VQVQDHQLPI SWGSEDYVDL  300
DSILFY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10241385
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10500.17e-06NAC domain containing protein 53