PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00401g00087.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 530aa    MW: 58550.5 Da    PI: 7.7129
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00401g00087.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.57.7e-25187243259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +DgynWrKYGqK+vk+ + +rsYYrC++++C++kk +e+s++  +v+e++Y+++Hnh+
  Peaxi162Scf00401g00087.1 187 RDGYNWRKYGQKQVKSPQGSRSYYRCSHSECCAKK-IECSDHTSRVIETIYRSQHNHD 243
                               7********************************98.*********************7 PP
2WRKY98.25.2e-31393450259
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                               +Dgy+WrKYGqK+vkg+++pr+YYrCtsagCpv+k++er+ ++++ ++itY+g H+h+
  Peaxi162Scf00401g00087.1 393 SDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIERAVDNTSGLIITYKGVHDHD 450
                               7********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.2E-21182245IPR003657WRKY domain
SuperFamilySSF1182906.93E-20184245IPR003657WRKY domain
SMARTSM007747.3E-24186244IPR003657WRKY domain
PROSITE profilePS5081118.842188245IPR003657WRKY domain
PfamPF031061.4E-17188243IPR003657WRKY domain
Gene3DG3DSA:2.20.25.804.5E-32377452IPR003657WRKY domain
SuperFamilySSF1182903.4E-27386452IPR003657WRKY domain
PROSITE profilePS5081132.351387452IPR003657WRKY domain
SMARTSM007744.3E-36392451IPR003657WRKY domain
PfamPF031064.7E-24394449IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 530 aa     Download sequence    Send to blast
MDETVKQAVD GENLERKVSK KGNSSVQDGG VVESSDDCCK VMSGADSRGE DKAEIVNSET  60
LVTVQSSVQS KFDTDTSSSH QLSEIPVEYA LQPFDSAKQI KDRISVTRAE TLSAQAQTEH  120
RQHVPDEASS MEPSPTSVTQ SISSARSPTI AERQLSAVVN STTGEVAKQS SDAKVLPIVP  180
VVKTPARDGY NWRKYGQKQV KSPQGSRSYY RCSHSECCAK KIECSDHTSR VIETIYRSQH  240
NHDPPPRVNC SRESKHTLLP APANDNSIIA RPNRSFNETV PSSLKENLQE KAPIAETANQ  300
DSCGSDDDTE ITIKEEHSDE PEQKKRQVLS CMEFNYYHLF HLLDVQKHRI HPKFSPIVTR  360
LKTSDTSCAE SISKPGKKPK LVVHAACDVG ISSDGYRWRK YGQKMVKGNP HPRNYYRCTS  420
AGCPVRKHIE RAVDNTSGLI ITYKGVHDHD MPVPKKRHGP PSAPLAIAAT PSSLTNLQAE  480
KSELVQHQPT TQWSVDKQGE LTGEKLDLGG EKTMEPARTL LSIGFEIKPC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-27188452275WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009624879.10.0PREDICTED: probable WRKY transcription factor 32
TrEMBLA0A1S4CV830.0A0A1S4CV83_TOBAC; probable WRKY transcription factor 32
TrEMBLA0A1U7XL730.0A0A1U7XL73_NICSY; probable WRKY transcription factor 32
STRINGXP_009624879.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA91892127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.11e-111WRKY DNA-binding protein 32