PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00411g00026.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family C2H2
Protein Properties Length: 188aa    MW: 21683.7 Da    PI: 8.5825
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00411g00026.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.60.000434567123
                              EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                              ++C+ C+k+F++   L  H  +H
  Peaxi162Scf00411g00026.1 45 FECKTCNKRFPSFQALGGHRASH 67
                              89**********99999998887 PP
2zf-C2H215.64.6e-0586108123
                               EEETTTTEEESSHHHHHHHHHHT CS
                   zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                               ++C++Cg++Fs    L  H+r+H
  Peaxi162Scf00411g00026.1  86 HECSICGMVFSLGQALGGHMRRH 108
                               78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501579.8684572IPR007087Zinc finger, C2H2
SuperFamilySSF576672.19E-945108No hitNo description
SMARTSM003550.0754567IPR015880Zinc finger, C2H2-like
PfamPF139121.1E-124568IPR007087Zinc finger, C2H2
PROSITE patternPS0002804767IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.602.7E-484111IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.69986113IPR007087Zinc finger, C2H2
SMARTSM003550.03686108IPR015880Zinc finger, C2H2-like
PfamPF139125.2E-1086111IPR007087Zinc finger, C2H2
PROSITE patternPS00028088108IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MSAMKRSREE DRQVEAEAMA NCASMLLSKI NDHKTSKNQD DWDDFECKTC NKRFPSFQAL  60
GGHRASHKRL KLLAGVGEQQ AKKKMHECSI CGMVFSLGQA LGGHMRRHRD ENNKSLKAER  120
KTMIPVLKKS NSNKRIFCLD LNLSPDDEDV DLKLWPTTLC FETCDDKDRT FWQANVNLDI  180
DPPNYKRY
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009608410.11e-78PREDICTED: zinc finger protein ZAT12-like
SwissprotQ9SLD44e-31ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLO220856e-85O22085_PETHY; ZPT2-13
STRINGXP_009608410.14e-78(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.12e-33C2H2 family protein