PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00433g00411.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family HSF
Protein Properties Length: 461aa    MW: 51579.8 Da    PI: 4.6529
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00433g00411.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind110.41.3e-34461372102
                               HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXX CS
              HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksF 86 
                               Fl+k++++++d+ l+++isw ++g+sf+v+d+ ef++ +Lp++Fkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F
  Peaxi162Scf00433g00411.1  46 FLSKTFDLVDDPLLDSVISWGTKGDSFIVWDSVEFSRFILPRHFKHNNFSSFVRQLNTYGFRKIDADK---------WEFANEGF 121
                               9****************************************************************999.........******** PP

                               XXXXXXXXXXXXXXXX CS
              HSF_DNA-bind  87 kkgkkellekikrkks 102
                                +gk++ll++i+r+ks
  Peaxi162Scf00433g00411.1 122 LRGKRHLLKNIQRRKS 137
                               **************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF467852.99E-3341135IPR011991Winged helix-turn-helix DNA-binding domain
Gene3DG3DSA:1.10.10.105.2E-3642135IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004151.2E-5442135IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004477.1E-3046135IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.6E-184669IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.6E-188496IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS00434085109IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000568.6E-1897109IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009408Biological Processresponse to heat
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 461 aa     Download sequence    Send to blast
MNPFDNTETE MDPLLNFESL TTPFEDELSI MPQPMECLHG IQIPPFLSKT FDLVDDPLLD  60
SVISWGTKGD SFIVWDSVEF SRFILPRHFK HNNFSSFVRQ LNTYGFRKID ADKWEFANEG  120
FLRGKRHLLK NIQRRKSPQS HHAGSSSGSS AEAGKAAMDE IEKLRKEKSL MMQEVVELQQ  180
QQRGTVQQME AVNEKLHAAE QRQKQMVSFL AKVFQNPTFL ARVQQMKEQG KITSPRTMRK  240
FVKHQLHDPG RVESSMEGQI VKYRPDFQDL AISCENLHFD PVVGQQLPGT GFGVEAMPFK  300
GGSVASEGLA VAHELLESPD RAIEGALNFN SEDSHFKGKN VASPQLDVMP ECFVSFPEEL  360
ANEKNISEFP SPGIECMVKE EGVWSMGFEA SAGMSSTGTE LWGSLSNYDV SDFGVSSGLS  420
DVWDIDPLQA AGSSGVDQWP DDESPFDQPE SHASQPKNDS F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-244313517120Heat shock factor protein 1
5d5u_B3e-244313526129Heat shock factor protein 1
5d5v_B3e-244313526129Heat shock factor protein 1
5d5v_D3e-244313526129Heat shock factor protein 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016473897.10.0PREDICTED: heat stress transcription factor A-3-like
TrEMBLA0A1S4AB660.0A0A1S4AB66_TOBAC; heat stress transcription factor A-3-like
STRINGXP_009621033.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA87272025
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.13e-90heat shock transcription factor A3