PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00459g00810.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

GeBP

Protein Properties

Length: 281aa MW: 32821.3 Da PI: 4.1719

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00459g00810.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	38.4	3.4e-12	159	251	6	97
DUF573 6 lwseeD..eivlLqGlidfkaktgkspsddidafyefvkksi.sfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqk 87 ++ ++D ++++L+ l ++g ps +++++ +k+si ++k+ ++l++K+ L ++fk+ ++ +g++p++ ++ d++ Peaxi162Scf00459g00810.1 159 MYEDDDdqDLAILKSLSHIYYSNGYVPSPSSNELHKHIKDSIpNLKIRGEELINKVFTLEDQFKTVREL--DGDDPDMPRPVDRE 241 5666653369******************************5589*****************99..********** PP DUF573 88 ifelskkiWg 97 if+ls++iWg Peaxi162Scf00459g00810.1 242 IFKLSMSIWG 251 *******8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	4.9E-9	165	251	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence Send to blast
MTRIYKIEEE VPAFDLARAL RIDDYGNQET EQRERRDQES DHNEEEERNQ ENNNGHQEHR 60 DINAEVESHD NNQSSENGNQ ESEQNEKNED ENQKDEDEAD DEEDEKRKAI AKGKRPMSEI 120 CKLTVMVPKF SSLQKGETSY KVEEEAKNSP PEEELNQDMY EDDDDQDLAI LKSLSHIYYS 180 NGYVPSPSSN ELHKHIKDSI PNLKIRGEEL INKVFTLEDQ FKTVRELDGD DPDMPRPVDR 240 EIFKLSMSIW GNSEDNVGHN QGAYDENIQY QALTYFLKDF L

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016453452.1	4e-58	PREDICTED: protein PFC0760c-like
TrEMBL	A0A1S3YN79	1e-56	A0A1S3YN79_TOBAC; protein PFC0760c-like
STRING	XP_009630430.1	3e-54	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5014	3	7