PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00461g00116.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 214aa    MW: 23410.2 Da    PI: 9.9278
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00461g00116.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.35e-201363256
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                              +y+GVr ++ +gr++AeIrdp++   ++r++lg+f+ ae+Aa+a++aa+++++g+
  Peaxi162Scf00461g00116.1 13 HYRGVRKRP-WGRYAAEIRDPCK---KTRVWLGTFDNAEDAARAYDAAAREFRGH 63
                              69*******.**********854...5**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.0E-321370IPR001471AP2/ERF domain
SuperFamilySSF541713.07E-221371IPR016177DNA-binding domain
CDDcd000189.83E-181370No hitNo description
PfamPF008478.6E-131363IPR001471AP2/ERF domain
PROSITE profilePS5103223.4991370IPR001471AP2/ERF domain
SMARTSM003804.0E-371376IPR001471AP2/ERF domain
PRINTSPR003671.1E-101425IPR001471AP2/ERF domain
PRINTSPR003671.1E-103652IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MTATATGKFK EMHYRGVRKR PWGRYAAEIR DPCKKTRVWL GTFDNAEDAA RAYDAAAREF  60
RGHKAKTNFP FPDSEMENKK YKNNNNNRDS DRSPSQNSTI DESSPPLDLR LGTAPTTATA  120
GAAVGLFSNG VGRFLFETPV VGGIVTGAPA VNHMFYLNAL KSFRGGSGGG DGGGDSGRIR  180
VKSESDSIDY LCKDVKPSRR LINLDLNFPP PENM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-211071264ATERF1
3gcc_A3e-211071264ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009618542.12e-67PREDICTED: ethylene-responsive transcription factor 4-like
RefseqXP_016448710.12e-67PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLE7FKW35e-66E7FKW3_TOBAC; Ethylene response factor 6b
STRINGXP_009618542.18e-67(Nicotiana tomentosiformis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.11e-26ethylene responsive element binding factor 4