PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00469g00141.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 249aa    MW: 27598.4 Da    PI: 8.8058
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00469g00141.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.62.2e-1357103354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h+ +ErrRR+riN  + +Lr+++P        K++Ka+ L k++ +Ik+L
  Peaxi162Scf00469g00141.1  57 KNHSDAERRRRERINGHLGTLRTIIPGT-----NKMDKAALLAKVISHIKEL 103
                               58*************************6.....5****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.26254103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.16E-1157104No hitNo description
PfamPF000104.0E-1157103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.108.9E-1458104IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.88E-1358106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.2E-1260109IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd048738.25E-4142209No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MEFFNTLNGY NENYGFQGMI RNGSSLILDN ERGELVKALV RPGQKGVNPE KALIALKNHS  60
DAERRRRERI NGHLGTLRTI IPGTNKMDKA ALLAKVISHI KELRVNAAEA TKGVLVPTDI  120
DEVRVEQQAE GSDGAAYSVK ASLCCDYKHE LISDLRQALD TLPLKTLKAE IATLGSRMVS  180
VFVITERNEV NIEDAERCQV LVTSVRQALR SVLDKFYASE EFSSRSTLSS KRRRVSLLDS  240
SSSSSLADF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16267ERRRRE
2230234KRRRV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754460.0HG975446.1 Solanum pennellii chromosome ch07, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009611307.11e-143PREDICTED: transcription factor bHLH30-like
RefseqXP_016491701.11e-143PREDICTED: transcription factor bHLH30-like
TrEMBLA0A1S4BS571e-142A0A1S4BS57_TOBAC; transcription factor bHLH30-like
STRINGXP_009611307.11e-143(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA119892123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.16e-32bHLH family protein