PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00472g00077.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 469aa    MW: 52159.3 Da    PI: 9.6596
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00472g00077.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.72e-32196252360
                               -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                      WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                               DgynWrKYGqK+vkgse+prsYY+Ct+ +Cpvkkkvers+ d+++ ei+Y+geHnh+k
  Peaxi162Scf00472g00077.1 196 DGYNWRKYGQKQVKGSEYPRSYYKCTHLKCPVKKKVERSH-DGQIAEIVYRGEHNHPK 252
                               9***************************************.***************85 PP
2WRKY100.59.9e-32388444258
                               --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 
                               +Dg++WrKYGqK+vkg+ +prsYYrCts++C+v+k ver+ +dp+++++tYeg+Hnh
  Peaxi162Scf00472g00077.1 388 EDGFRWRKYGQKVVKGNSYPRSYYRCTSPKCNVRKFVERTIDDPNALITTYEGKHNH 444
                               7******************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-29185253IPR003657WRKY domain
SuperFamilySSF1182902.75E-25193253IPR003657WRKY domain
SMARTSM007741.5E-36194252IPR003657WRKY domain
PfamPF031062.6E-25196251IPR003657WRKY domain
PROSITE profilePS5081124.134196253IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.7E-32375447IPR003657WRKY domain
SuperFamilySSF1182903.27E-28381447IPR003657WRKY domain
PROSITE profilePS5081131.64382447IPR003657WRKY domain
SMARTSM007744.6E-36387446IPR003657WRKY domain
PfamPF031065.1E-25388444IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009957Biological Processepidermal cell fate specification
GO:0010214Biological Processseed coat development
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 469 aa     Download sequence    Send to blast
MEVNDAEKIA IARPVASRPR CPIYRSFSEL LAGAINTSST NVHSEMAITA IKPKTVRLKP  60
AANHALIGEL ASQVGMSGAP VDCRSDNVLQ SAEKPKVLYK PMAKLAPRKN ISLLENKGSS  120
APDQKREIAE DEAEGHVQSA SEVKQQNSLT TKSRQSLLAK SRQDKRIMQS AIVSENTEEV  180
EQSLLNTNNV DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THLKCPVKKK VERSHDGQIA  240
EIVYRGEHNH PKPQPPKRNF SDGQGRALVS NDTSKETINP ALSNQYPQTS EANVHRIENQ  300
ADVGLSTHSA YSSKPPCFYD PTPGAGMYCA FRNSEDLAER DKKLEADCDE PKTKRRKIEG  360
QPNGAGTSGE SALPHMSIQN TTDSEITEDG FRWRKYGQKV VKGNSYPRSY YRCTSPKCNV  420
RKFVERTIDD PNALITTYEG KHNHGIPSRR PNSEASKTSS KSSAMKDKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-30196448178Probable WRKY transcription factor 4
2lex_A2e-30196448178Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKU6410090.0KU641009.1 Petunia x hybrida cultivar R27 WRKY transcription factor (PH3) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016445312.10.0PREDICTED: WRKY transcription factor 44-like
RefseqXP_016445313.10.0PREDICTED: WRKY transcription factor 44-like
TrEMBLA0A142I5D80.0A0A142I5D8_PETHY; WRKY transcription factor
STRINGXP_009600193.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA99512227
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37260.14e-87WRKY family protein