PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00493g00013.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 283aa MW: 32936.2 Da PI: 5.5581

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00493g00013.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	133.3	1.6e-41	22	148	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 p GfrF Ptd+el+++yLk+kv+g++l+ ++i+e+ iy ++P++L ++++++e++wyfFs r++k+++g+++nr + +g+Wk Peaxi162Scf00493g00013.1 22 PLGFRFLPTDDELINDYLKNKVNGEPLPR-NTIQEAFIYLYHPEELCrNNMHQRENKWYFFSGRERKHPKGRKPNRqVKGKGFWK 105 89***********************99.88**********7578999999****************6677* PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 atg dkev++ +++ vg kk+L fy+g +++++++W mheyrl Peaxi162Scf00493g00013.1 106 ATGADKEVTH-NDQIVGYKKSLDFYEGIPKNAKRSEWKMHEYRL 148 ******.999**************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.45E-45	19	177	IPR003441	NAC domain
PROSITE profile	PS51005	45.001	21	178	IPR003441	NAC domain
Pfam	PF02365	2.8E-23	22	148	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence Send to blast
MENDRENNYQ TLSDEQFFDS IPLGFRFLPT DDELINDYLK NKVNGEPLPR NTIQEAFIYL 60 YHPEELCRNN MHQRENKWYF FSGRERKHPK GRKPNRQVKG KGFWKATGAD KEVTHNDQIV 120 GYKKSLDFYE GIPKNAKRSE WKMHEYRLDH KSPPPDANNS LANGNEFGRY VLCAIYLNTA 180 AKNNNQIKKE SNGSEDLTTD DEAMHSVNYD NIQEDPISNE FQQHENFLGF KNMQESGDQF 240 LQHGAPYNYD VQNHGGSDVH SLQDFDELSV VVNQATNHQM MGC

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	8e-32	20	176	16	163	NO APICAL MERISTEM PROTEIN
1ut4_B	8e-32	20	176	16	163	NO APICAL MERISTEM PROTEIN
1ut7_A	8e-32	20	176	16	163	NO APICAL MERISTEM PROTEIN
1ut7_B	8e-32	20	176	16	163	NO APICAL MERISTEM PROTEIN
3swm_A	8e-32	20	176	19	166	NAC domain-containing protein 19
3swm_B	8e-32	20	176	19	166	NAC domain-containing protein 19
3swm_C	8e-32	20	176	19	166	NAC domain-containing protein 19
3swm_D	8e-32	20	176	19	166	NAC domain-containing protein 19
3swp_A	8e-32	20	176	19	166	NAC domain-containing protein 19
3swp_B	8e-32	20	176	19	166	NAC domain-containing protein 19
3swp_C	8e-32	20	176	19	166	NAC domain-containing protein 19
3swp_D	8e-32	20	176	19	166	NAC domain-containing protein 19
4dul_A	8e-32	20	176	16	163	NAC domain-containing protein 19
4dul_B	8e-32	20	176	16	163	NAC domain-containing protein 19

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009611016.1	6e-98	PREDICTED: NAC transcription factor 29-like
Refseq	XP_016449653.1	6e-98	PREDICTED: NAC transcription factor 29-like
TrEMBL	A0A1S3YCC1	1e-96	A0A1S3YCC1_TOBAC; NAC transcription factor 29-like
STRING	XP_009611016.1	2e-97	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA15339	6	8

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	2e-38	NAC domain containing protein 25