PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00497g00086.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 554aa    MW: 61801.4 Da    PI: 6.0153
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00497g00086.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like85.84.2e-27310363155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k +++WtpeLH++Fv+aveqL G+++A+P++ilelm+++gLt+++v+SHLQk+R+
  Peaxi162Scf00497g00086.1 310 KVKVDWTPELHKKFVKAVEQL-GIDQAIPSRILELMNIEGLTRHNVASHLQKFRM 363
                               5689*****************.********************************8 PP
2Response_reg34.79.3e-13221272109
                               EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHH CS
              Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeee 84 
                               l+ d++++ +  +r+ lek +y +v +  d  eal  +  k   +++ ++ ++  ++dG   lk +++++ +lp i+v++  + +
  Peaxi162Scf00497g00086.1  22 LLLDKDNNSAFEMRSRLEKMDY-IVYTYCDENEALSAVSSKSevFHVAIVEVNADNSDG--GLKFLESAK-DLPTIMVSDIHSIS 102
                               77899*****************.***************777778************776..344454555.89************ PP

                               HHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  85 dalealkaGakdflsKpfdpeelvk 109
                               ++ +++ +Ga +fl Kp + ++l +
  Peaxi162Scf00497g00086.1 103 TMMKCIALGAVEFLQKPLSDDKLSN 127
                               ********************99976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004480.004419129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011020.10720133IPR001789Signal transduction response regulator, receiver domain
SuperFamilySSF521722.13E-1321135IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.3E-1422140No hitNo description
CDDcd001564.78E-822132No hitNo description
PfamPF000725.3E-822127IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5129414.044307366IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.0E-26308367IPR009057Homeodomain-like
SuperFamilySSF466897.77E-18308366IPR009057Homeodomain-like
TIGRFAMsTIGR015578.4E-24310364IPR006447Myb domain, plants
PfamPF002491.8E-7313361IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 554 aa     Download sequence    Send to blast
MVCTENELLG WKDFPKGLRV LLLLDKDNNS AFEMRSRLEK MDYIVYTYCD ENEALSAVSS  60
KSEVFHVAIV EVNADNSDGG LKFLESAKDL PTIMVSDIHS ISTMMKCIAL GAVEFLQKPL  120
SDDKLSNIWQ HVVHKAFNSG AKNVPESLKP VKESLLPMLE LKQVKSEADD ENLNGAETFT  180
SVVDNQESQP CCDKYPAPST PQLNQGVWSL DDGDLQDHTI LSTEQDSGVH EGDTKSVDTA  240
CWNSVAETTV LADFPGHISE GISKEEHDSF ADQKMEDRNA TCSQSSDCPG NGSTHSGLHS  300
SSGTRANKKK VKVDWTPELH KKFVKAVEQL GIDQAIPSRI LELMNIEGLT RHNVASHLQK  360
FRMQRRQILP KEDERRWPRT QPRDSAQRSY YPHKPLMAFP TYHSNHAPNA SQFYPAWVPP  420
GSYPNGLHMW GSPYYPGWQH AENWHWKPHP GLYADVWGCP VMPPSLGSSP SYPQNASGFH  480
RADGIQNKHS ILEKSVEYQP AEDVIDKVVK EAINNPWLPL PLGLKPPSIE SVLDALSQQG  540
ISTVPSHING SRRP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-17308368363ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-[AG]GATT-3'. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009595585.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_009595586.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_009595587.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_009595588.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_009595589.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_018624868.10.0PREDICTED: two-component response regulator-like APRR2
RefseqXP_018624869.10.0PREDICTED: two-component response regulator-like APRR2
SwissprotQ6LA431e-134APRR2_ARATH; Two-component response regulator-like APRR2
TrEMBLA0A1S3X7R10.0A0A1S3X7R1_TOBAC; two-component response regulator-like APRR2
STRINGXP_009595585.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA56731531
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.61e-134ARR-B family protein
Publications ? help Back to Top
  1. Gong L, et al.
    Transcriptome Profiling of the Potato (Solanum tuberosum L.) Plant under Drought Stress and Water-Stimulus Conditions.
    PLoS ONE, 2015. 10(5): p. e0128041
    [PMID:26010543]