PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00498g00042.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 347aa    MW: 39179.4 Da    PI: 9.5146
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00498g00042.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH48.41.7e-15167213354
                               HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                       HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                               ++h + ErrRR+++N+ f++Lr+llP++     +K +Ka++L  ++eYI+sL
  Peaxi162Scf00498g00042.1 167 VNHMISERRRREKLNDNFQQLRSLLPPS-----TKKDKASVLATTTEYISSL 213
                               58999*********************99.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.32E-18164234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.796164213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.03E-13166218No hitNo description
PfamPF000107.7E-13167213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-17168231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-14170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MDITNLFSED FSTSRELPSQ PLSTDQYNKP SSSSSSLRSL SIDSPEYSSL LYNVATTSSY  60
VTESPQTEAL PRIQGLQGED AAIRRAYLAV ISSPRQIQGN SPRDYRLATQ KATAFRRFRS  120
ALGPNVPIAT RTCKQNMFKR SIIFFRNINM IRRREHIQMN CPTNTQVNHM ISERRRREKL  180
NDNFQQLRSL LPPSTKKDKA SVLATTTEYI SSLKAQVEEL GKKNEILETQ LLAPSYNQHG  240
DECFSSGKSG KLAVHITNIT SESISEARII DLQVIVKEQC NILNMVIHLL EFLKNVNNVS  300
LESVQTNTRN VQSGSVTLIT LRLRIQGDEW DESTFLEAAK RIVGDMT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1172177ERRRRE
2173178RRRREK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016506510.11e-115PREDICTED: putative transcription factor bHLH041
TrEMBLA0A1S4CZB51e-114A0A1S4CZB5_TOBAC; putative transcription factor bHLH041
STRINGXP_009624851.11e-112(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA45672339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.13e-43bHLH family protein