PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00504g00008.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 267aa    MW: 29707.4 Da    PI: 5.3925
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00504g00008.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.39.7e-26131411121
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLp.k.....kvka..eekewyfFskrdkkyatgkrknr 76 
                               lppG rF P+d++l+++yL  k + ++ + ++  ike+d+y+++P +Lp +            +++w+ F + ++  + g   +r
  Peaxi162Scf00504g00008.1  13 LPPGTRFYPSDSQLISFYLSSKNQPQPEPDHTNlIKELDLYNYDPFNLPdSscfkyG--RggCKRHWFCFLEISRVLKGG--GRR 93 
                               79**********************9995554444**************953665331..222445888888888877654..556 PP

                       NAM  77 atksgyWkatgkdkevlsk..kgelvglkktLvfykg.rapkgektdW 121
                               ++  gyWk+ g+ ++v+ +  ++ ++g++k+++fy g + ++++ktdW
  Peaxi162Scf00504g00008.1  94 KAGGGYWKKRGRVRDVVGEgtGKVVIGTRKSFAFYLGdSVKSATKTDW 141
                               7799*************99767778**********884567789**** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.32E-307152IPR003441NAC domain
PROSITE profilePS5100528.97713171IPR003441NAC domain
PfamPF023651.1E-1314141IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MGDPNLSPNP FSLPPGTRFY PSDSQLISFY LSSKNQPQPE PDHTNLIKEL DLYNYDPFNL  60
PDSSCFKYGR GGCKRHWFCF LEISRVLKGG GRRKAGGGYW KKRGRVRDVV GEGTGKVVIG  120
TRKSFAFYLG DSVKSATKTD WASFVLCRVF IKSRQGNSLS EQHVLSSYGE ETVGAVRHVG  180
IQYDGPASVS EYKMHDENSI DQENDVSKLP NVLVTDLNDQ TLTKQQIDLE SEGPPVLNDF  240
SAQELMAILE GDFIELDDLL CPLPGIS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A4e-181114113133Stress-induced transcription factor NAC1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18997GGRRKAGGG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009771077.11e-126PREDICTED: NAC domain-containing protein 19-like isoform X1
RefseqXP_016443535.11e-126PREDICTED: NAC domain-containing protein 19-like isoform X1
TrEMBLA0A1S3XUJ21e-125A0A1S3XUJ2_TOBAC; NAC domain-containing protein 19-like isoform X1
TrEMBLA0A1U7VT571e-125A0A1U7VT57_NICSY; NAC domain-containing protein 19-like isoform X1
STRINGXP_009771077.11e-126(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA135281314
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.16e-12NAC family protein