PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00519g00056.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family MYB_related
Protein Properties Length: 63aa    MW: 7346.21 Da    PI: 4.6931
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00519g00056.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.25.2e-10749545
                              -HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
           Myb_DNA-binding  5 TteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                              T  Ed l+ +a+ +++     +Wk+Ia++++  +t+ +++s++ 
  Peaxi162Scf00519g00056.1  7 TRHEDVLFEQAIVLYPEQitdRWKLIAEHVP-DKTPQEIISHYD 49
                              678*************99*************.**********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0027254IPR001005SANT/Myb domain
SuperFamilySSF466891.57E-10760IPR009057Homeodomain-like
CDDcd001671.10E-8748No hitNo description
Gene3DG3DSA:1.10.10.601.5E-4752IPR009057Homeodomain-like
PfamPF002494.0E-8950IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 63 aa     Download sequence    Send to blast
MSTTSRTRHE DVLFEQAIVL YPEQITDRWK LIAEHVPDKT PQEIISHYDD LVHDVLKIDS  60
GQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009795456.12e-22PREDICTED: transcription factor DIVARICATA-like
RefseqXP_016473251.12e-22PREDICTED: transcription factor DIVARICATA-like
TrEMBLA0A1S4A9J25e-21A0A1S4A9J2_TOBAC; transcription factor DIVARICATA-like
TrEMBLA0A1U7Y0L85e-21A0A1U7Y0L8_NICSY; transcription factor DIVARICATA-like
STRINGXP_009795456.19e-22(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.11e-15MYB family protein