PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00521g00049.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

NAC

Protein Properties

Length: 575aa MW: 66569.8 Da PI: 6.1503

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00521g00049.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179	1.2e-55	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyW 83 lppGfrFhPtdeelv +yLk+k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyfF +rd+ky++g+r+nratk+gyW Peaxi162Scf00521g00049.1 6 LPPGFRFHPTDEELVAYYLKRKINGRTIEL-EIIPEVDLYKCEPWDLPgKsLLPSKDLEWYFFGPRDRKYPNGSRTNRATKAGYW 89 79**************************.99***********6434555777*********************** PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 katgkd++v s + ++vg+kktLv+y+grap+g +tdWvmheyrl Peaxi162Scf00521g00049.1 90 KATGKDRKVNS-QMRAVGMKKTLVYYRGRAPHGARTDWVMHEYRL 133 *******.9999*************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	7.45E-63	4	156	IPR003441	NAC domain
PROSITE profile	PS51005	61.493	6	156	IPR003441	NAC domain
Pfam	PF02365	1.9E-29	7	133	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 575 aa Download sequence Send to blast
MAPVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPGKSLLPSK 60 DLEWYFFGPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH 120 GARTDWVMHE YRLDERECEV ANGLQDAYAL CRIFKKSLNA PKVEYPFAST ATDRSSSIDV 180 YSEGRSDHDI MECSEHRRPS PTCSSMVANG SPLHDVAGPS DDKWMQYISD AAFSFNNPSI 240 PNYGTLPYAP KVNIALECAR LQHRFSLPPL EVHDFSEAGY VKSRMPQSSY INQNTNQTSQ 300 DLKNQDSWDG NYAPTSHDFS FLPHDNNEIH DLGSFHFMEQ FKEDQIARST EFGELDGHFK 360 SDRIVENLRW VEMSDMDLEK AFLEDYKTVP VENVSSVVKE EYELEGETNG HNNSFNEFNK 420 IEDNFSLGFG NSNNADEFSN SLCLEVYEKI EINHRMLIAT QQASKTLYHQ VVPSTTVRIH 480 QNFEKSELIK LPQNRTTFFD CLFEVLRKKL LMTRSWRRAL DLLVGVIALL NILWMYFNLC 540 LENQGLVEKN IEGKEKNRKA HDYQWSCKEW PYFTL

Sequence ? help Back to Top

Protein Sequence Length: 575 aa Download sequence Send to blast

MAPVSLPPGF RFHPTDEELV AYYLKRKING RTIELEIIPE VDLYKCEPWD LPGKSLLPSK  60
DLEWYFFGPR DRKYPNGSRT NRATKAGYWK ATGKDRKVNS QMRAVGMKKT LVYYRGRAPH  120
GARTDWVMHE YRLDERECEV ANGLQDAYAL CRIFKKSLNA PKVEYPFAST ATDRSSSIDV  180
YSEGRSDHDI MECSEHRRPS PTCSSMVANG SPLHDVAGPS DDKWMQYISD AAFSFNNPSI  240
PNYGTLPYAP KVNIALECAR LQHRFSLPPL EVHDFSEAGY VKSRMPQSSY INQNTNQTSQ  300
DLKNQDSWDG NYAPTSHDFS FLPHDNNEIH DLGSFHFMEQ FKEDQIARST EFGELDGHFK  360
SDRIVENLRW VEMSDMDLEK AFLEDYKTVP VENVSSVVKE EYELEGETNG HNNSFNEFNK  420
IEDNFSLGFG NSNNADEFSN SLCLEVYEKI EINHRMLIAT QQASKTLYHQ VVPSTTVRIH  480
QNFEKSELIK LPQNRTTFFD CLFEVLRKKL LMTRSWRRAL DLLVGVIALL NILWMYFNLC  540
LENQGLVEKN IEGKEKNRKA HDYQWSCKEW PYFTL

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut4_B	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut7_A	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
1ut7_B	2e-55	1	162	12	171	NO APICAL MERISTEM PROTEIN
3swm_A	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_B	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_C	2e-55	1	162	15	174	NAC domain-containing protein 19
3swm_D	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_A	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_B	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_C	2e-55	1	162	15	174	NAC domain-containing protein 19
3swp_D	2e-55	1	162	15	174	NAC domain-containing protein 19
4dul_A	2e-55	1	162	12	171	NAC domain-containing protein 19
4dul_B	2e-55	1	162	12	171	NAC domain-containing protein 19
Search in ModeBase

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00212	DAP	Transfer from AT1G65910	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC226509	4e-65	AC226509.1 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0144P17, complete sequence.
GenBank	HG975514	4e-65	HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019267109.1	0.0	PREDICTED: NAC domain-containing protein 86-like
TrEMBL	A0A314KYT1	0.0	A0A314KYT1_NICAT; Nac domain-containing protein 86
STRING	XP_009598687.1	0.0	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA1495	23	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	1e-144	NAC domain containing protein 28