PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00547g00042.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ERF
Protein Properties Length: 219aa    MW: 24153.8 Da    PI: 4.5238
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00547g00042.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.98.9e-172473255
                       AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                              +y+GVr +k +g++v+eIr p++   r r++lg+++tae+Aa+a +aa  +l+g
  Peaxi162Scf00547g00042.1 24 KYTGVRKRK-WGKFVSEIRLPNS---RERIWLGSYDTAEKAARAFDAALFCLRG 73
                              79****999.**********933...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.6E-282482IPR001471AP2/ERF domain
SMARTSM003801.8E-312487IPR001471AP2/ERF domain
CDDcd000182.83E-282483No hitNo description
PROSITE profilePS5103221.0742481IPR001471AP2/ERF domain
SuperFamilySSF541713.53E-192482IPR016177DNA-binding domain
PfamPF008471.5E-92473IPR001471AP2/ERF domain
PRINTSPR003677.8E-92536IPR001471AP2/ERF domain
PRINTSPR003677.8E-94763IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
MVKPERQSST DKKDSSPSSS SSFKYTGVRK RKWGKFVSEI RLPNSRERIW LGSYDTAEKA  60
ARAFDAALFC LRGRAAKFNF PNNPPDILNG RSMTPAQIQV AAALFANSDP EPRENSAPCS  120
SISSSSELLL NADSPCPSVS DEVVQFDGQT IESSMDNGFV DLFSSMGTTN NVFDFGIFPG  180
FDHLYDELFV PSLPNIDYLE DNYNGFSSEG GKEKILENI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1724821473Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016443748.15e-82PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A1S3XUX51e-80A0A1S3XUX5_TOBAC; ethylene-responsive transcription factor ERF017-like
STRINGXP_009624342.12e-80(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA19392466
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-48ERF family protein