PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00557g00071.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 632aa    MW: 69878.3 Da    PI: 4.9934
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00557g00071.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like75.85.7e-24214267155
                   G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                               k++++Wt  LH++F+ea++++ G +kA Pk+il+lm+v gLt+e+v SHLQkYR+
  Peaxi162Scf00557g00071.1 214 KAKVVWTDSLHNKFLEAIREI-GFDKAAPKKILDLMNVTGLTRENVSSHLQKYRI 267
                               6799*****************.********************************6 PP
2Response_reg71.34e-24231311109
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               +l+vdD+ + ++++  +l+k +y +v +++++ +al +l+ k   +Dl++ D+ mp+m+Glel + i++e  +lp+++++a + e
  Peaxi162Scf00557g00071.1  23 ILVVDDDVTCLSIVSMMLKKWKY-QVVTVKHPMDALSTLRIKGrcIDLVIADVHMPDMSGLELQQVIAQEF-ELPVVLMSADDRE 105
                               89*********************.9999***********877778**********************9999.9************ PP

                               HHHHHHHHTTESEEEESS--HHHHHH CS
              Response_reg  84 edalealkaGakdflsKpfdpeelvk 109
                                ++le lk Ga  f++Kp++ ++l++
  Peaxi162Scf00557g00071.1 106 GTILEGLKGGAAFFIVKPISLDDLRD 131
                               ***********************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23002.9E-3214135No hitNo description
SuperFamilySSF521723.42E-3020137IPR011006CheY-like superfamily
SMARTSM004481.9E-2521133IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011035.46822137IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.6E-2023131IPR001789Signal transduction response regulator, receiver domain
CDDcd001562.48E-2324134No hitNo description
PROSITE profilePS5129410.616210270IPR017930Myb domain
SuperFamilySSF466891.25E-17212271IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.5E-25213271IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-23214267IPR006447Myb domain, plants
PfamPF002492.0E-6217266IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 632 aa     Download sequence    Send to blast
MEVETLVNKF CVADDESVER ISILVVDDDV TCLSIVSMML KKWKYQVVTV KHPMDALSTL  60
RIKGRCIDLV IADVHMPDMS GLELQQVIAQ EFELPVVLMS ADDREGTILE GLKGGAAFFI  120
VKPISLDDLR DLWQYTALQR NKKGKNVVLK EIDGSEKSSN CFQKSLYEFR ESAPSISENG  180
CQEVKQGKSK RRSAKEQGDA DKDNNADSDT PVKKAKVVWT DSLHNKFLEA IREIGFDKAA  240
PKKILDLMNV TGLTRENVSS HLQKYRIFLQ KVSDASSIIQ TADRSLARRA IQSNIASKGL  300
SNFSQFHQEI SGSKQKLINN SSNPNSVIDT YHGGLSFTQQ ARNHISLSGY GQPELVRGED  360
NLANTRVNIE NLLYRANQLS IPMEANKNQI RSDDISTQLM SGNTSTQVGA RPTGNPANRL  420
SGRNLLALGT NGIATHTTLK GNLNFLHNGI ADDQRFDAEK LSNFTQNKDA EEASDFLAGI  480
MEFIGKGHDD SDQRLAQEAS SLVGLEGEKL FPTILSDHID EKTWLPSFVI DVGRGEEVGA  540
VLDPVCNFSV FHNINAKQES RGFGDLGSSF LNQVNRQTHQ QQDHIGLTES AEDGVSQLHD  600
VFFSPAESKD EEFLELMLAS SPSEDDQNLD GV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A2e-20210273164ARR10-B
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009603673.10.0PREDICTED: putative two-component response regulator ARR21 isoform X2
TrEMBLA0A1S3XYK00.0A0A1S3XYK0_TOBAC; two-component response regulator ORR24-like isoform X3
STRINGXP_009603673.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA32902038
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.12e-57response regulator 2