PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00574g00712.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family FAR1
Protein Properties Length: 137aa    MW: 15764.7 Da    PI: 4.6256
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00574g00712.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.13.9e-1553122282
                      FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkle 82 
                                Y +Y ++ GFs++k++        +i+ ++fvCskeg+r++++ +   ++r+r etr +Ck ++ ++++ +g w+vt+l 
  Peaxi162Scf00574g00712.1  53 LYLNYTHRSGFSIKKDN--------SIIGQQFVCSKEGFRSKRSLE---SNRQRDETREECKVMIYLSEKAEGMWMVTRLA 122
                               799*********98774........5999*************9988...9999*************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031018.1E-1253122IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 137 aa     Download sequence    Send to blast
DKPETSNLPN QNEEGTGAAL EELENDMNVT VDDEPREPYI GMDFPSPDIA FELYLNYTHR  60
SGFSIKKDNS IIGQQFVCSK EGFRSKRSLE SNRQRDETRE ECKVMIYLSE KAEGMWMVTR  120
LARTIIMNLL LHIAKNS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025884722.19e-44protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A3Q7EE036e-40A0A3Q7EE03_SOLLC; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA645860
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.29e-17FAR1 family protein