PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00583g00020.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family NAC
Protein Properties Length: 603aa    MW: 67205.1 Da    PI: 4.4662
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00583g00020.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM151.34.5e-4731291127
                       NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyW 83 
                               lppGfrFhPtd el+++yLk+k+ gkkl + e+i+e++iyk+ PwdLp k++++ ++ ewyfF++r++kya+g r nra ++gyW
  Peaxi162Scf00583g00020.1   3 LPPGFRFHPTDVELIMYYLKRKIMGKKLLF-EAISELNIYKFSPWDLPdKCFYKsKDLEWYFFVPRERKYASGARMNRASETGYW 86 
                               79*************************888.89***************7655441556*************************** PP

                       NAM  84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                               k tgkd+++   ++++vg  ktLvf++g+ap+g++tdWv+hey 
  Peaxi162Scf00583g00020.1  87 KVTGKDRPIRY-DDKTVGSVKTLVFHQGTAPRGKRTDWVIHEYI 129
                               **********9.999****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.37E-572153IPR003441NAC domain
PROSITE profilePS5100553.9853153IPR003441NAC domain
PfamPF023653.6E-234128IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 603 aa     Download sequence    Send to blast
MKLPPGFRFH PTDVELIMYY LKRKIMGKKL LFEAISELNI YKFSPWDLPD KCFYKSKDLE  60
WYFFVPRERK YASGARMNRA SETGYWKVTG KDRPIRYDDK TVGSVKTLVF HQGTAPRGKR  120
TDWVIHEYIF DEKDLADAGV PLGSYVLCKV FQKSGPGPKN GAQYGAPFKE EDWEDDEVPA  180
EHNPSSLPSL PVFPENQSCS MVTCMADPGS ASRGPFNELH PSSSNLPSVC AMPAALNSSD  240
ITPLPALPEN LSCSVDTTMA DRENESMWPL TESGPSFAKL GSQEMPPDEE DDIFHLFDNF  300
TEDPAIFPAG DENNLCLNNL NQGRNVEDAP FIDGYDIYNG LGNLDNYAEL DQTTFGVSVT  360
QGADYSHNSL FLQDAPYLEL NDLEIPLSHT AETIETAGLM MGNFCAPHDS DVDMRQLCFG  420
GNSSASSQQV SGQNQLPALP EHYIQEVNYN VTNTNQGYNA AYTSDFSSYK QPEDSSYACQ  480
NQERGEQQRK FFSSMHAHCA SNSLCLGFSI HVKAEVILWV DGCTNDALSA VFGDFSSILT  540
CQSAVDNPHK RVCGYFYDIT TAFYFGISLV FIFVSSLRFV VQFLLGVDLS SSTVLLRKLQ  600
INA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-48115313168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006355147.10.0PREDICTED: NAC domain-containing protein 82-like isoform X1
TrEMBLA0A0V0II020.0A0A0V0II02_SOLCH; Putative NAC domain-containing protein 78-like (Fragment)
STRINGXP_009762029.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA60502334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G09330.44e-85NAC domain containing protein 82