PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00585g00513.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family WRKY
Protein Properties Length: 353aa    MW: 39105.2 Da    PI: 5.8465
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00585g00513.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.34.8e-31169227259
                               --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                      WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                               +D ++WrKYGqK++kgs++pr+YY+C+++ gC ++k+ver+++dp+++++tY+ eHnh+
  Peaxi162Scf00585g00513.1 169 SDMWSWRKYGQKPIKGSPYPRGYYKCSTSkGCLARKQVERNRSDPNMFIVTYTAEHNHP 227
                               79************************9988****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.2E-31155229IPR003657WRKY domain
PROSITE profilePS5081135.335163229IPR003657WRKY domain
SuperFamilySSF1182901.57E-26166229IPR003657WRKY domain
SMARTSM007741.0E-36168228IPR003657WRKY domain
PfamPF031067.3E-26170227IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MEEQDWDLHA VVRSCAATNS ATTTTATTTT SVTTSCSINI QPISNFQPRQ DVENNSFCSQ  60
DLYFDPRFAQ HTSFEELHEL CKPFITESPP QKLPLSPLSV LGGLQKQEQQ QKPLIHQLNS  120
TRPIQPKRPL SLNGSTISTT SLHAQSPRTK RRKNQSKKVC QVAADALSSD MWSWRKYGQK  180
PIKGSPYPRG YYKCSTSKGC LARKQVERNR SDPNMFIVTY TAEHNHPMPT HRNSLAGVSR  240
HKAGNSETGT VAAESNKPTS SSPVSSPVTN SPAPENQESS RDEREDIFEE DDDEFGVSNN  300
MALDNMEPDD DFFEGLEELE VPITGEILPE KFNGNLQFPW LGNNAATTAA GGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-21154230380Disease resistance protein RRS1
5w3x_D2e-21154230380Disease resistance protein RRS1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016545773.11e-134PREDICTED: WRKY transcription factor 22-like
TrEMBLA0A2G2VST21e-134A0A2G2VST2_CAPBA; WRKY transcription factor 22
STRINGXP_009590526.11e-132(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA25912457
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.14e-61WRKY family protein