PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00643g00612.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

BBR-BPC

Protein Properties

Length: 316aa MW: 35481.4 Da PI: 9.8679

Description

BBR-BPC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00643g00612.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GAGA_bind	323.6	5.9e-99	1	316	1	301
GAGA_bind 1 mdddgsrernkgyyepa.aslkenlglqlmssiaerdaki........rernlalsekkaavaerd................... 57 md +g ++ n+g++ep+ + lk +lglqlmss+ e+ + +++++ +++++++++ Peaxi162Scf00643g00612.1 1 MDGNGGMNLNWGFFEPTaTVLKGHLGLQLMSSMDEK---PlfgntgdhHQQHHHDLHHHQTHQPHHptvmestnggafhhhrvcg 82 9999*********99899*********665...434466666444444445555554444688999999999999 PP GAGA_bind 58 ........maflqrdkalaernkalverdnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklea 134 m++ +rd++l++ + ++k+++++l n ++ +g++ l++t+s++s+q+ + p+l + ++ e e+ Peaxi162Scf00643g00612.1 83 fsefpsmpMDY-MRDAWLNH-----KDYREKYFSNVLSGN---HHYLTGYGFLPETSSAQSMQMNQLPNLVKVEPA-PQLE--EV 155 *******.***9.....556788999988666...578899***********444554433222.2222..22 PP GAGA_bind 135 lpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGal 219 ++ e+ ++e +k+ k+q k+pk+kka kk ++++k+++ ++s +r++a++ks ++ +ng+ +D+s++P+P+CsCtGa Peaxi162Scf00643g00612.1 156 FQ-ERDKSELAKKRGAGKSQLLKSPKTKKA---KKATRAPKDES-TPSI-PRARAPRKSAEILINGIYMDISGIPIPICSCTGAA 234 22.222333333333333444555555555...55444665555.4554.79***************************** PP GAGA_bind 220 rqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +qCY+WG+GGWqSaCCtt++S yPLP++tkrrg+RiagrKmS gafkk+LekLa+eGy++snp+DLk +WAkHGtnkfvtir Peaxi162Scf00643g00612.1 235 QQCYRWGCGGWQSACCTTNLSSYPLPINTKRRGSRIAGRKMSLGAFKKVLEKLASEGYNFSNPIDLKPYWAKHGTNKFVTIR 316 *******************************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF06217	2.6E-99	1	316	IPR010409	GAGA-binding transcriptional activator
SMART	SM01226	3.3E-146	1	316	IPR010409	GAGA-binding transcriptional activator

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence Send to blast
MDGNGGMNLN WGFFEPTATV LKGHLGLQLM SSMDEKPLFG NTGDHHQQHH HDLHHHQTHQ 60 PHHPTVMEST NGGAFHHHRV CGFSEFPSMP MDYMRDAWLN HKDYREKYFS NVLSGNHHYL 120 TGYGFLPETS SAQSMQMNQL PNLVKVEPAP QLEEVFQERD KSELAKKRGA GKSQLLKSPK 180 TKKAKKATRA PKDESTPSIP RARAPRKSAE ILINGIYMDI SGIPIPICSC TGAAQQCYRW 240 GCGGWQSACC TTNLSSYPLP INTKRRGSRI AGRKMSLGAF KKVLEKLASE GYNFSNPIDL 300 KPYWAKHGTN KFVTIR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009761371.1	1e-179	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_009761378.1	1e-179	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_016499158.1	1e-179	PREDICTED: protein BASIC PENTACYSTEINE2-like
Refseq	XP_016499159.1	1e-179	PREDICTED: protein BASIC PENTACYSTEINE2-like
TrEMBL	A0A1S4CDX5	1e-177	A0A1S4CDX5_TOBAC; protein BASIC PENTACYSTEINE2-like
TrEMBL	A0A1U7V4R1	1e-177	A0A1U7V4R1_NICSY; protein BASIC PENTACYSTEINE2-like
STRING	XP_009761371.1	1e-178	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA10048	20	26

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14685.3	9e-81	basic pentacysteine 2