PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00671g00061.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

FAR1

Protein Properties

Length: 155aa MW: 17981.5 Da PI: 9.0863

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00671g00061.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.4	1.3e-24	36	125	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 +fYneYA+++GFs+ k++ +++++ g +t+r+++C keg++e +k++ + +++r++ r gC+ +++++ + +gk+++tk++ eH Peaxi162Scf00671g00061.1 36 NFYNEYARRIGFSTLKEYANTNNKFGYMTSRKMTCFKEGFNEYDKRR-TYVKNPRKQIRSGCQPHIVITHQPSGKYRITKVDVEH 119 6*****************************************999.999****************************** PP FAR1 86 nHelap 91 nH+l p Peaxi162Scf00671g00061.1 120 NHPLIP 125 *975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	3.7E-22	36	125	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 155 aa Download sequence Send to blast
MFNTAHNKVL QNKSQVHIDL ESKLGLEFDC DDDAINFYNE YARRIGFSTL KEYANTNNKF 60 GYMTSRKMTC FKEGFNEYDK RRTYVKNPRK QIRSGCQPHI VITHQPSGKY RITKVDVEHN 120 HPLIPLSMVH MLPSHKKINQ VHADAIDLAE DAGLL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009799718.1	4e-62	PREDICTED: protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A314KN16	3e-75	A0A314KN16_NICAT; Protein far1-related sequence 5
STRING	XP_009799718.1	2e-61	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3021	17	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-26	FAR1-related sequence 5