PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00683g00033.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family ARR-B
Protein Properties Length: 593aa    MW: 66667.8 Da    PI: 4.5885
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00683g00033.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like65.87.4e-21234282554
                   G2-like   5 rWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                               +Wt+eLH++F+eav+ L G+ +  Pk+ilelm+v+gLt+ +v+SHLQk R
  Peaxi162Scf00683g00033.1 234 EWTSELHDKFMEAVRLL-GEGRCYPKEILELMNVPGLTRMQVASHLQKCR 282
                               7****************.9*****************************98 PP
2Response_reg28.48.1e-11171191104
                               EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTH CS
              Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgee 83 
                               vl+vd ++ +      +le+ +y +v++ d ++ a+ ++ + +  +D++++ +  p++  ++ll +  +++  +  i+v +   +
  Peaxi162Scf00683g00033.1  17 VLVVDHDKEFVFETVDLLESYEY-KVTTIDLASTAMSMISKGKgcFDIMIVNVHSPDLLSFQLLAQAVASN--IVSIFVCDDYHS 98 
                               89*********************.***************99999*************99999999876655..555555566667 PP

                               HHHHHHHHTTESEEEESS--H CS
              Response_reg  84 edalealkaGakdflsKpfdp 104
                                +a +al+ Ga  +l Kp ++
  Peaxi162Scf00683g00033.1  99 VLARRALDIGAYLYLKKPLHE 119
                               9*****************765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.54E-1414145IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.6E-1314137No hitNo description
SMARTSM004480.004115125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011021.77416130IPR001789Signal transduction response regulator, receiver domain
PfamPF000728.1E-617120IPR001789Signal transduction response regulator, receiver domain
CDDcd001567.27E-818136No hitNo description
PROSITE profilePS5129411.388226286IPR017930Myb domain
SuperFamilySSF466891.7E-15230282IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-20232283IPR009057Homeodomain-like
TIGRFAMsTIGR015573.4E-19233283IPR006447Myb domain, plants
PfamPF002496.4E-7234281IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 593 aa     Download sequence    Send to blast
MENLMAPYYG MIDEVRVLVV DHDKEFVFET VDLLESYEYK VTTIDLASTA MSMISKGKGC  60
FDIMIVNVHS PDLLSFQLLA QAVASNIVSI FVCDDYHSVL ARRALDIGAY LYLKKPLHEE  120
FVKYMWQFVL RERLKKENER EERTGEMNIV DNGVIIHNNV AGNEQVGVKI ILNNNEDNHD  180
ESDDHTEVET NNNVVSKGKY KVRRSKRGRK RTITTEVEPD SQSTGSPRRK VCTEWTSELH  240
DKFMEAVRLL GEGRCYPKEI LELMNVPGLT RMQVASHLQK CRNDNWRVPE ARKARHHNGK  300
GSSSGSQKRV SQRKFGSMPR LQTNFVQQQP NQDQSERVPL PPALLFPPLN NNNIFARGES  360
STHPQVYRPQ LVHVEPRYVD PLLSQINARG LQQHAGGPFG TSGMGQGGPV IDESDVYTPE  420
LEDHVQNDYN MNVNIGHGAY SDSAMISDTN ENVTMDDFVA AAANANFQQF YGDHNLSDPS  480
MNIIASQASD SETGSDERTN CDEYFDFNDV DYLFQNLGPP DNDIPNETGG SDFDPIYSDD  540
QVAPTPSVQF PGTTSFPDEQ GGSEFYQVYS DDQVTPTPSV QFSGTTNFPD EST
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016461121.10.0PREDICTED: two-component response regulator ORR21-like
TrEMBLA0A1J6J4W60.0A0A1J6J4W6_NICAT; Two-component response regulator arr1
STRINGXP_009798262.11e-134(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8132384
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.18e-29response regulator 2