PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00689g10026.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

Dof

Protein Properties

Length: 261aa MW: 28516.6 Da PI: 6.296

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00689g10026.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	46.8	6.2e-15	58	85	36	62
zf-Dof 36 C.rryWtkGGalrnvPvGggrrknkkss 62 C rryWtkGG+lrn+PvGgg+rknkk s Peaxi162Scf00689g10026.1 58 CpRRYWTKGGTLRNIPVGGGCRKNKKIS 85 549**********************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	8.0E-8	50	83	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.8E-9	58	83	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence Send to blast
MGITSLQACM DSSNWLQDTI HEETELDSTS SPSDDIFTCS RPLMERKLRP PHDKPINCPR 60 RYWTKGGTLR NIPVGGGCRK NKKISTKKLS NDTTHQINSS SNQTSTISFP EMAFSHFNNF 120 VGLGNSPSNF MLENNISTPI DFMVGNTSRN QDFIGNVDLG MINGYGEISG NGINGQNFHA 180 GICSTFGMSM DGNNFGNIKY EGHNTIDDVK PNPNILSLEW HDHQGCSNAG NKEPFGYFSG 240 GLGSWTGLMN GYGSSATNPL I

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009599905.1	1e-122	PREDICTED: dof zinc finger protein DOF5.6-like
TrEMBL	A0A1S4CAV1	1e-120	A0A1S4CAV1_TOBAC; dof zinc finger protein DOF5.6-like
STRING	XP_009599905.1	1e-122	(Nicotiana tomentosiformis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4895	22	40

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28510.1	9e-12	Dof family protein