PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Peaxi162Scf00705g00001.1

Organism

Petunia axillaris

Taxonomic ID

33119

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia

Family

G2-like

Protein Properties

Length: 266aa MW: 30277.1 Da PI: 8.219

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Peaxi162Scf00705g00001.1	genome	SGN	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.6	6.7e-29	21	72	2	53
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 +rlrWtp LH++F++a+++LGG++kAtPk +l+lm+v gLt++hvkSHLQ Y Peaxi162Scf00705g00001.1 21 ARLRWTPHLHRSFLHAIHKLGGQDKATPKLVLQLMDVRGLTISHVKSHLQNY 72 69*************************************************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	8.2E-27	17	73	IPR009057	Homeodomain-like
PROSITE profile	PS51294	12.691	17	77	IPR017930	Myb domain
SuperFamily	SSF46689	4.3E-14	20	74	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.6E-21	22	73	IPR006447	Myb domain, plants
Pfam	PF00249	8.6E-8	22	72	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MGNCGRINAG GVRQYTRSKV ARLRWTPHLH RSFLHAIHKL GGQDKATPKL VLQLMDVRGL 60 TISHVKSHLQ NYITPRARME IASCKPEELQ HCSQKICEAV ANRPYRYSGD DYMQTINVER 120 SWAKKRTMEG ETGFTRQQII SDTQKEADSV CHSTSYFPLD FFQSCNLPGN ALQQSENFKL 180 SSVQQDENWE PWKKCKIERL RKIAENEEKL DDERCELSLS LSLHDPCAQT RSNTCSTNEA 240 ISSYSTSSSH ENHTVNLGLS IALCSQ

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
6j4k_A	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J	8e-19	21	78	3	60	Protein PHOSPHATE STARVATION RESPONSE 1
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Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_019258511.1	1e-68	PREDICTED: putative Myb family transcription factor At1g14600 isoform X1
Refseq	XP_019258512.1	1e-68	PREDICTED: putative Myb family transcription factor At1g14600 isoform X2
TrEMBL	A0A314LFE3	3e-67	A0A314LFE3_NICAT; Putative myb family transcription factor
STRING	XP_009766440.1	2e-61	(Nicotiana sylvestris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5433	22	38

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14600.1	8e-32	G2-like family protein